Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5634 ATGGCAGGAGGGGGAGCTCCAAAGTCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCCAATATTTCTTACTGCATTACCAGTCCTCCTCCATGGCCCGAGGCTATACTTCTTGGCTTTCAACATTTTCTTGTAATGCTTGGTACAACTGTGCTCATTCCCTCTGCTCTTGTTCCTCAGATGGGAGGTGGCAATAATGAGAAGGCAAGAGTTATCGAAACGCTACTTTTTGTAGCTGGTATTAACACACTGCTACAAACACTGTTTGGAAGTCGACTGCCCGCAGTTATTGGAGGCTCTTATACCTATGTTGCCACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTGATGAACCTGATCCAATAGAGAAATTCAAGAAGATAATGAGGGCAATCCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCCTATGGCGTAATGTTGCGAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAATTAGGTTTTCCTGGGGTAGCTAAATGTATAGAGATTGGACTTCCGGAGCTTGTGTTGATAGTATTTGTTTCACAGTATGTGCCACATGTTCTACACAAGGGGAAACATATCTTTGATCGTTTCGCTGTTATATTTACAATTGTAATTGTATGGATATATGCTCATCTTCTCACTGTTGGAGGGGCCTATAACAATGCGGCACATAAGACACAAATATCCTGCCGCACTGATCGTGCTGGACTTATTGATAACGCTCCTTGGATTAGAGTTCCATACCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCAGCTTTTGTTGCTCTTGTAGAGTCCACTGGAGCTTTCATTGCAGTATATAGGTATGCAAGTGCAACACCATTACCACCATCTATTCTTAGTCGTGGTATTGGTTGGCAGGGAGTTGGCATTCTGTTATCAGGATTGTTTGGAACAGTTACTGGATCTTCTGTATCCGTAGAAAATGCAGGTCTTTTGGCTCAGACCCGTGTTGGTAGTAGAAGAGTTGTGCAAATATCAGCTGGATTTATGATTTTCTTTTCGATTCTTGGAAAATTTGGAGCTGTTTTCGCCTCCATCCCAGCTCCCATTTTTGCTGCCCTGTACTGCTTGTTCTTCGCTTATGTCGGTGCCGGAGGAATTAGTTTTCTTCAGTTTTGCAACCTCAACAGCTTTAGAACAAAGTTCATATTAGGCTTCTCTATCTTCCTCGGCTTGTCTATACCACAGTACTTCAACGAGTACACGGCAATCAATGGCTTTGGTCCGGTCCACACCGGCGCCAGATGGTTCAATGATATAATCAATGTTCCGTTCCAATCAAAACCATTTGTTGGGGGTGTTGTGGCATATTTCTTAGACAACACTTTATACAAGCGAGATTCTGCTATAAGGAAGGACAGAGGGAAACATTGGTGGGACAAGTACAAGTCCTTCAAAGGGGACACGAGAAGTGAAGAGTTCTATTCACTACCATTCAATCTAAACAAGTACTTCCCATCTGTTTAA 1593 0.4325 MAGGGAPKSDEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPSALVPQMGGGNNEKARVIETLLFVAGINTLLQTLFGSRLPAVIGGSYTYVATTISIILAGRFSDEPDPIEKFKKIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCIEIGLPELVLIVFVSQYVPHVLHKGKHIFDRFAVIFTIVIVWIYAHLLTVGGAYNNAAHKTQISCRTDRAGLIDNAPWIRVPYPFQWGAPSFDAGEAFAMMMAAFVALVESTGAFIAVYRYASATPLPPSILSRGIGWQGVGILLSGLFGTVTGSSVSVENAGLLAQTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIFAALYCLFFAYVGAGGISFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIINVPFQSKPFVGGVVAYFLDNTLYKRDSAIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5634 530 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g5634 530 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 530 - -
Lja1g5634 530 Pfam Permease family 36 440 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja1g5634 530 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5634 Lja-Chr1 98864765 98871140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5634 6 530 Organic Solute Cotransporters AT5G49990 79.658 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5634 - - gmx:100812585 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5634 1 98864765 98871140 Lja1g5634 1 98864765 98871140 ECH
Lja4g2237 4 24583379 24588872 Lja1g5634 1 98864765 98871140 PCT