Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2236 ATGGGAAATTGCCAAGCCATTGATACTGCAACTCTAGTGATACAGCAACCCAATGGGAAAGAAGAGAAGTTGTATTGGCCTGTGAGTGCTAGTGAAGTGATGAAGACAAACCCTGGTCACTATGTTGCTCTCCTCATCTCCACCACATTGTGCACATCAAAGGACAGTGAAAACTGTCCTAATAAGAAGAGTGACAGCAACACCACCAACCCAGTTCGCCTTACCCGCATCAAACTTCTCAAGCCAACAGATACCCTTGTGCTTGGCCAAGTATATAGACTCATCTCAGCGCAAGAGGTTATGAAGGGTCTGTTGGCTAAGAAACAAGCCAAGATGAAGAGAAACGAGTCAGAATCAGCACCAAAGATAAATCAGAAGAAGGAAATGATGGACAAACCAGCAAGGAGGTCTGAGCCTGAGGAAAACCAGGAAGCCAAAAATGAAAGACATGGGTCAAGGACAACAGCATCAACTACTAATGCTGCTATCACAACAGCTAAGTCAAGAACATGGCAACCCTCATTAAAAAGCATCTCTGAAGCAACAAGCTGA 552 0.4457 MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCPNKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESAPKINQKKEMMDKPARRSEPEENQEAKNERHGSRTTASTTNAAITTAKSRTWQPSLKSISEATS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2236 183 MobiDBLite consensus disorder prediction 108 183 - -
Lja4g2236 183 PANTHER DUF4228 DOMAIN PROTEIN 1 183 - -
Lja4g2236 183 PANTHER EXPRESSED PROTEIN 1 183 - -
Lja4g2236 183 Pfam PADRE domain 1 180 IPR025322 -
Lja4g2236 183 MobiDBLite consensus disorder prediction 109 151 - -
Lja4g2236 183 MobiDBLite consensus disorder prediction 152 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2236 Lja-Chr4 24572331 24573954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2236 - - aprc:113847180 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2236 4 24572331 24573954 Lja4g2236 4 24572331 24573954 ECH
Lja4g2236 4 24572331 24573954 Lja1g5633 1 98840574 98841757 PCT