Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g5633 | ATGGGGAATTGCCAAGCTATTGATGCTGCAACAATAGTGATTCAACACCCTAATGGTAAAGTAGAAAGGTTTTACTCACCTATGAGCGCACGCCTAGTTATGAAAATGAACCCTGCTCATTATGTTGCCCTTCTCATCTCCACCAGCACATTGTCTCCAAACAAGGACATTGGTAACTGCCCCAATAAGAATAGTGACACCAACACCAACAACACATACCCAGTTCGCTTAACTCGCATAAAGCTTCTCAAGCCCAATGATTCCCTCCTTCTAGGCCATGTTTATAGACTCATCACAGCTCAAGAGGTAATGAAGGGCCTAAAGGAAAGGAAACAAGCAAAGATGAAGCAGAATATGCCGGGGTCAGGTCACAAGTCAGATTGGGTGAAGGGAAAAATTGGATTGGAGATGGACAACAAAGCAGAAAGAAGATTAGACACAGAGGACAACAAGGTAACCAAACCTGAAAAACCTCGACCAAGGACAAGATTTTGGCAACCCTCTTTACAGAGCATCTCAGAGGTAGTTGGATAA | 534 | 0.4363 | MGNCQAIDAATIVIQHPNGKVERFYSPMSARLVMKMNPAHYVALLISTSTLSPNKDIGNCPNKNSDTNTNNTYPVRLTRIKLLKPNDSLLLGHVYRLITAQEVMKGLKERKQAKMKQNMPGSGHKSDWVKGKIGLEMDNKAERRLDTEDNKVTKPEKPRPRTRFWQPSLQSISEVVG* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g5633 | 177 | PANTHER | EXPRESSED PROTEIN | 1 | 175 | - | - | |
| Lja1g5633 | 177 | MobiDBLite | consensus disorder prediction | 113 | 177 | - | - | |
| Lja1g5633 | 177 | MobiDBLite | consensus disorder prediction | 129 | 161 | - | - | |
| Lja1g5633 | 177 | Pfam | PADRE domain | 1 | 174 | IPR025322 | - | |
| Lja1g5633 | 177 | PANTHER | DUF4228 DOMAIN PROTEIN | 1 | 175 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g5633 | Lja-Chr1 | 98840574 | 98841757 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g5633 | - | - | gmx:100813476 | 222.246 |
Event-related genes