Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2193 ATGAAGAGTGCTCTTTTCATCAGCTTCTTGTTTTCTTGCTCTCTGCTGCTTTTAGACTCTTCAACTTCACTTCCTCTATGCACTGATTCAAGGGCACCCTTTACCGTCAATACCACACTTGAATTTTGCCCTTATAATGGAAGCACATGTTGCAACTTCACAGAAGATGCACAAATACAGAAGCAATTCCAACTGATGAAAGTATCTGATCCTGGCTGTGCCTCGCTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCTTTTTCAGCTGAGCTATTTACAGTTCAATCCACACCTAGATCAGTTCCCGTACTTTGCAATTCTGCCATTTCAGCAAATTCTTCACAGTCAAAGGTTGATGTGCAGAACTTTTGCTCTGAAGTGTGGGATACATGTCAAACTGTGTCCATAACAAACTCACCATTCTCCCCTTCATTACAAAGCCAAGGAGGAGGAATACAACTAAACACCAGTGCAACCAAACTAACTGATTTATGGCAGTCCAAAACAGATTTTTGCAATGCATTTGGTGGAGGCTCCAACAATGAATCACTATGCTTTGAGGGAGAACCTGTTGCCTTGAATAACACTGAGACTAGTCCTATAAGCTCCCCACATGGTTTGTGCATTGAGAAAATTGGAAGTGGATCTTATATCAACATGGTAGCTCACCCTGATGGCTCAAACCGTGCATTCTTCTCTAATCAAATGGGTAAAGTTTGGTTGGCAACTATTCCTGATATGGGGTCAGGAGAAAAATTGAAGCTTGATGAGTCAAGTCCCTTTGTTGATCTAACTGATCATGTTTATTTTGATACTCAATTTGGAATGATGGGCATGGCATTTCATCCGAATTTCGCAAACAATGGTCGATTCTTCGCTTCATTCAACTGCGATAAAGATAAGTGGTCAGGGTGTAATGGGAGATGTTCTTGTAATTCAGATGTTAACTGTGATCCTTCAAAGCTAGGTGATGGTAATGGTGCTCAACCATGTCAGTACCAAACTGTTGTTGCAGAATATACTGCTAATGGGACTGCGTCTCAGCCATCCGCGGTGGAAAGTGCTAAACCAACAGAGGTGAGGAGGATATTTACCATGGGACTCCCATTTACATCTCAACATGGAGGTCAGATACTCTTTGGACCTGGTGATGGGTATTTATACTTCATGATGGGATATGGAGGAGGTTCAGGTGATCCATTCAATTTTGCCCAAAACAAGAAATCATTGCTTGGAAAGATCATGAGGCTTGATGTAGACAACATTCCAAGTGCATCAGAAATTACCAAACTTGGCCTTTGGGGTAGCTACTCCATTCCCAAGGATAATCCATTCAGGGAAGATAAAAATGTGCAGCCTGAAATATGGGCCTTGGGATTAAGAAATCCTTGGCGATGTAGTTTTGATTCAGAAAGACCTTCCTACTTTTTTTGTGGAGATGTTGGCCAGGATCTTTACGAGGAGGTGGATCTCATCACTAAAAGTGGAAACTATGGCTGGCGTGTGTATGAAGGACCTTATCTATCCACTCTTACAGAGTCATCTGCAGGAAATACCTCGCTTAATTCCATAAATCCAATTCCCCCAATATTGGGATACAACCATTCTGAAGTAAACAAGAATGAAGGGTCAGCATCTATTACTGGGGGATATGTCTATCGATCTAGGACTGATCCTTGTATGTATGGAAGGTACCTGTATGCTGATCTTTATGCAGGTGCAATGTGGGCAGCAATTGAAGACCCTGAAAATAGTGGAGACTTCAGCACTAGCAGAATCCCTTTCAGTTGTCCCCATGATTCTCCTATCCAATGTGGCTCAGTACCTGGAAGCTCCCTTCCAGCTCTGGGATACATCTTTTCATTTGGTGAAGACAACAGCAAGGATGTTTATATTCTTGCAAGCACTGGTGTTTACCGAGTTGTTCCCCCAAGTCGCTGTAACTATGCTTGTTCACAAGAAAAGGCAACAACTACTCCTTCTTCATCTCATGCAAGCCATTGGAGTAACTTTTATGGATATCTGTTTCTGCAGATTTCATCTTTCTTGTTGCTTTTGATGGGTTTTATGTAA 2076 0.4196 MKSALFISFLFSCSLLLLDSSTSLPLCTDSRAPFTVNTTLEFCPYNGSTCCNFTEDAQIQKQFQLMKVSDPGCASLLKSILCARCDPFSAELFTVQSTPRSVPVLCNSAISANSSQSKVDVQNFCSEVWDTCQTVSITNSPFSPSLQSQGGGIQLNTSATKLTDLWQSKTDFCNAFGGGSNNESLCFEGEPVALNNTETSPISSPHGLCIEKIGSGSYINMVAHPDGSNRAFFSNQMGKVWLATIPDMGSGEKLKLDESSPFVDLTDHVYFDTQFGMMGMAFHPNFANNGRFFASFNCDKDKWSGCNGRCSCNSDVNCDPSKLGDGNGAQPCQYQTVVAEYTANGTASQPSAVESAKPTEVRRIFTMGLPFTSQHGGQILFGPGDGYLYFMMGYGGGSGDPFNFAQNKKSLLGKIMRLDVDNIPSASEITKLGLWGSYSIPKDNPFREDKNVQPEIWALGLRNPWRCSFDSERPSYFFCGDVGQDLYEEVDLITKSGNYGWRVYEGPYLSTLTESSAGNTSLNSINPIPPILGYNHSEVNKNEGSASITGGYVYRSRTDPCMYGRYLYADLYAGAMWAAIEDPENSGDFSTSRIPFSCPHDSPIQCGSVPGSSLPALGYIFSFGEDNSKDVYILASTGVYRVVPPSRCNYACSQEKATTTPSSSHASHWSNFYGYLFLQISSFLLLLMGFM* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2193 691 Pfam Glucose / Sorbosone dehydrogenase 230 505 IPR012938 -
Lja4g2193 691 PANTHER HIPL1 PROTEIN-LIKE 5 690 - -
Lja4g2193 691 PANTHER HEDGEHOG-INTERACTING PROTEIN 5 690 - -
Lja4g2193 691 Gene3D - 213 609 IPR011042 -
Lja4g2193 691 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 193 511 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2193 Lja-Chr4 23638537 23642977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2193 - - gmx:100776176 1132.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2193 4 23638537 23642977 Lja4g2193 4 23638537 23642977 ECH
Lja4g2193 4 23638537 23642977 Lja1g5598 1 98001026 98007715 PCT