Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5598 ATGAAGGGTGTTATTTCCATCACGTTCTTGATTTGTTGCTTGCTTCTGCTTTTGGAATCTTCAATTTCACTTCCCCTATGCATTGATTCGAGAGCACCCTTTACACTGAATAATACAACAACACCTGGGTTTTGTCCTTACAATGGAAGCACGTGTTGCAACTCCACAGAAGATGCACAAATAGAGAAGCAATTCCGAATGAGGAACATTTCTGATTCTGCTTGTGCCTCGGTTGTGAAATCAATACTTTGTGCGAGGTGTGATCCATTTTCAGCGGAGCTATTTACAGTTCAATCCACACCCAGGTCAGTTCCAGTGCTTTGCAATTCAACCATACCAACAAATTCTTCTCAGTCAAAGGCAAAAGAAGAGGATTTCTGCACTCAAGTATGGGACACATGTAAAACTGTATCCATAGTGAACTCTCCATTTGCACCTTCATTACAAGGCCAGGCAGGAGCACCTGTTCATGCCAATGCCACCAAATTAACTGAACTATGGCAGTCGAAAACTGATTTCTGCACCGCATTTGGTAGAGAATCTGATAACTCATCAGTGTGCTTTGAAGGGGAACTTGTTTCACTGAATAAAACTGAGACGGCTCCTGTTACGCCCCCTCGTGGCGTGTGCTTTGAGAAAATTGGCAACGGATCTTATCTCAGCATGGTGGCTCATCCTGATGGCTCGAACCGTGCATTCTTCTCCAACCAAATGGGGAAGGTTTGGCTGGCGACACTTCCGGATCAAGGCTCAGGAGGCGCAATTGAGCTTGATGAGTCAAGCCCCTTTGTTGATCTCACTGATCAAGTCTATTTTGATACTCAGTTTGGAATGATGGGCATGGCCTTTCATCCAAATTTCTCGCAAAATGGCCGGTTCTTCGCTTCATTCAACTGTGATAAGTCCAAGTGGTCAGGATGTACCGGAAGATGCGCGTGTAACTCGGATGTTAATTGTGATCCATCAAAGATAGGTACTGATCATGGTGCACAGCCATGCCAGTATCAAACTGTTATTGCAGAATATACTGCTAATGGAACCGCATCTCAGCCTTCTTTGGCTGAAAGTGCTAAACCAACTGAAGTTAGAAGAATCTTTACCATGGGACTCCCATTTACCTCTCAACATGGAGGTCAAATACTCTTTGGACCTGATGATGGGTATTTATACTTCATGATGGGATATGGAGGAGGTCCAGGTGATCCTTACAATTTTGCACAGAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAACACAAATTAGCAAACTTGGGCTGTGGGGTAGCTACTCCATTCCACAGGACAATCCATATAGTGAAGATGAAGATCTGCAGCCTGAAATATGGGCCTTGGGACTAAGAAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGATCTTCCTACTTTTTTTGTGGAGACGTCGGACAGGATCTTTTTGAAGAGGTGGATCTCATAACAAAGGGTGGAAACTATGGTTGGCGAGCTTATGAGGGCCCCTATATATTCAACGCAACACAATCACCTGGAGGCAATACTTCATTAACATCCATAAATCCAATTTTCCCTATATTTGGATATAACCATTCTGAAGTAAACAAGAATGAAGGATCAGCATCGATTACTGGCGGCTATTTCTATCGCTCTAACACTGATCCTTGCACATATGGCAGGTACCTGTTTGGAGATCTGTATGCTGGTGCAATATGGGCAGCCACAGAAGACCCAGTAAACAGTGGAAACTTCAGCACTAGCAAGATTCCCTTTAGCTGTGCACATGATTCTCCTCTACGATGTGAGTCTGTACCTGGAACCTCTCTTTCAGCTTTAGGCTACATCTTCTCATTTGGTGAAGACAACAACAAAGATGTTTATATCCTTGCAAGCTCTGGTGTTTACCGAGTGGTTCGTCCGAGTCGCTGCAATTATGCTTGCTCACTGGAAAATGCAACAACCACTACAAGCCCTACTCCCTCTCCTTCTTCTCCTTCTCATGCTAACCGTTGGAGTAACTACTCTGGGTATTTGTTTTTGCAGTTTTCATCTTTCTTGTTACTTCTGTTGGGTTTTATGTAG 2100 0.4367 MKGVISITFLICCLLLLLESSISLPLCIDSRAPFTLNNTTTPGFCPYNGSTCCNSTEDAQIEKQFRMRNISDSACASVVKSILCARCDPFSAELFTVQSTPRSVPVLCNSTIPTNSSQSKAKEEDFCTQVWDTCKTVSIVNSPFAPSLQGQAGAPVHANATKLTELWQSKTDFCTAFGRESDNSSVCFEGELVSLNKTETAPVTPPRGVCFEKIGNGSYLSMVAHPDGSNRAFFSNQMGKVWLATLPDQGSGGAIELDESSPFVDLTDQVYFDTQFGMMGMAFHPNFSQNGRFFASFNCDKSKWSGCTGRCACNSDVNCDPSKIGTDHGAQPCQYQTVIAEYTANGTASQPSLAESAKPTEVRRIFTMGLPFTSQHGGQILFGPDDGYLYFMMGYGGGPGDPYNFAQNKKSLLGKIMRLDIDNIPSATQISKLGLWGSYSIPQDNPYSEDEDLQPEIWALGLRNPWRCSFDAERSSYFFCGDVGQDLFEEVDLITKGGNYGWRAYEGPYIFNATQSPGGNTSLTSINPIFPIFGYNHSEVNKNEGSASITGGYFYRSNTDPCTYGRYLFGDLYAGAIWAATEDPVNSGNFSTSKIPFSCAHDSPLRCESVPGTSLSALGYIFSFGEDNNKDVYILASSGVYRVVRPSRCNYACSLENATTTTSPTPSPSSPSHANRWSNYSGYLFLQFSSFLLLLLGFM* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5598 699 PANTHER HEDGEHOG-INTERACTING PROTEIN 1 698 - -
Lja1g5598 699 PANTHER HIPL1 PROTEIN-LIKE 1 698 - -
Lja1g5598 699 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 216 579 IPR011041 -
Lja1g5598 699 Gene3D - 215 629 IPR011042 -
Lja1g5598 699 Pfam Glucose / Sorbosone dehydrogenase 222 518 IPR012938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5598 Lja-Chr1 98001026 98007715 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5598 - - gmx:100778890 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2193 4 23638537 23642977 Lja1g5598 1 98001026 98007715 PCT