Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2023 ATGAAAACACTAGTCATGGACACACCAACAACAATCCCTCAAGACTTATCCTCCAAGAGGCACTTCCACTGGACCAGCAACAAGGTTGGAAACGAAGAAGCTGAACCACAACCACCCACCTCAGAAACAGTGACCAAAACCTTAAAGGATCACACAACAAAAGAGGATGATGACAAGGTTGTTTCAGCTTCAGGAATTTCAGCAACCACCTCACACGCAACCAGGAAGAAGCTTCAGGCGGTGGCGGTTTCCAGGCTACGCTCTGTTCTCACCATGTTCGGGAAGAATCGCTCCGGCCTACCCTTTGGACTCGGTTCTCGGGTTGTCGGTACGCTCTTCGGGTACCGTCGGGGGCATGTGCATTTCGCGTTTCAGAAGGACCCCACTTCGCCACCGGCGTTTCTCATCGAGCTGGCGACGCCGATAAGCGGTTTGGTTCGAGAAATGGCTTCTGGGTTGGTTCGAATTGCTCTGGAGTGTGATAAGGAGAAGGGGAAGGAGAAAGAGAAGGAAGCAGAGAAGAAGGGTGTGAGGTTGCTGCAGGAGCCTCTGTGGAGGACTTACTGTAATGGGAAGAAGTGTGGGTTTGCTACCAGGAGAGAATGCGGTGAGAAGGACTGGGAGATTCTGAAAGCGGTGGAGCCAATTTCAATGGGTGCTGGTGTTTTGCCAGGGAGTAATACTAAGAATGGAGGTGGTGGTGAAGGTGAAGCTGCAGGGTCTGATGGTGAAATCATGTACATGAGGGCAAGGTTTGAGAGAATTGTTGGGTCTAGAGACTCTGAGGCTTTCTACATGATGAATCCTGACAGCAATGGTACACCTGAGCTCAGTGTTTATTTGCTTAGAGTCTAG 855 0.5053 MKTLVMDTPTTIPQDLSSKRHFHWTSNKVGNEEAEPQPPTSETVTKTLKDHTTKEDDDKVVSASGISATTSHATRKKLQAVAVSRLRSVLTMFGKNRSGLPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSPPAFLIELATPISGLVREMASGLVRIALECDKEKGKEKEKEAEKKGVRLLQEPLWRTYCNGKKCGFATRRECGEKDWEILKAVEPISMGAGVLPGSNTKNGGGGEGEAAGSDGEIMYMRARFERIVGSRDSEAFYMMNPDSNGTPELSVYLLRV* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2023 284 PANTHER DUF617 FAMILY PROTEIN 1 284 - -
Lja4g2023 284 MobiDBLite consensus disorder prediction 1 57 - -
Lja4g2023 284 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g2023 284 Pfam Protein of unknown function, DUF617 108 283 IPR006460 GO:0010274
Lja4g2023 284 PANTHER PROTEIN MIZU-KUSSEI 1 1 284 IPR006460 GO:0010274
Lja4g2023 284 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 108 284 IPR006460 GO:0010274
Lja4g2023 284 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2023 Lja-Chr4 20990406 20991784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2023 - - gmx:100797914 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5416 1 91396438 91397238 Lja4g2023 4 20990406 20991784 ECH
Lja4g2023 4 20990406 20991784 Lja4g2023 4 20990406 20991784 ECH