Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1859 ATGGGTTTTCAAATGAGGCTTCTGGGTCTGTGTTTATGGGTGTGTTTTGTAAGCTTCAATGGAGTGAGTGCTCTGTATGGAAGAGGAGATGAAGCTGTGAAAGGTATTGTTCTTGTTCATGGGAAACATGCTATTGGAAAGATTGATAATGATTTTGTCTGCGCCACTCTGGATTGGTGGCCACCTCAGAAATGTGACTATGGAAAATGTAGTTGGGGTCATGCTTCTCTGCTTAATCTGGACCTCAACAACAAAATTTTGTTAAATGCAGTAAAAGCCTTTTCACCCTTGAAAATTAGATTAGGTGGCACTTTGCAAGATAAGGTCATATATGGGACTGAAGATAATAGGCAACCCTGTACTCCTTTTATTTGGAACCCAAGTGAAATGTTTGGTTTCACTCAAGGGTGCTTACCGATGCGTAGATGGGATGAGCTGAACAGCTTTTTCAGTAAAGCAGGGGCTAAGGTTATCTTTGGATTAAATGCTCTTGCTGGAAAACATGTAGTAAATTCCAGTTCTGCTGTTGGGCCTTGGAACTACAACAATGCTGAATCTTTTATAAGTTACACTGCAAGAAAGAAGTACACAATTCATGGCTGGGAACTTGGCAATGAATTGTGTGGAAATGGAATCGGAACAAGTGTTACTGCAAGTCAATATGCTTCTGACATAGCTGCTTTAAGAAACATAGTTCAAAATGTATACAGAGAGATTAAGCCTAAGCCACTAGTCATTGCACCTGGGGGCTTCTTTGATGCAAATTGGTTCAAGGAATTTTTAAGCCACTCTGGTAAAACTTTCGATGTGGCTACACACCACATTTATAACCTTGGAGCAGGAGTTGAGGACAAACTAACTGAAAAGATTCTGGACCCTTCCTATCTTGATGGAGTGGCTAGCACATTCAGCAGCCTCAAAAAAATACTTCAAAGTTCAGCAACCTCAGCACAAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTGTCAGATTCATTTGTCTATAGCTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTACATATGGCACCACTACATACTGCAGACAGAGTTTGATTGGAGGAAACTATGGTTTACTGAATACTGCTACATTCGTGCCGAATCCGGACTACTATAGTGCTCTTCTGTGGCACCGACTTATGGGGCGGCGTGTTCTGTCTACTACCTTCTATGGGACAAAGAAGATAAGAGCTTATACACACTGTGCAAAGGAATCAAATGGAATCACAATACTATTGCTCAATTTGGACAACAGCACAACTGTTCAAGCTGAAGTGGCCTTAACATTTCCTAAGCATCCTTACCATCGTGGGGGTGGACTATTCAGAAGAGAGTACCATTTGACACCAAAGGATGGGGACTTACATAGCCAAATCATGCTACTAAATGGAAACATTCTAACTGTAAACTCAGCTGGTGAAATCCCCCCCTTGGTTCCTCTATATATAGACCCGTCAAAACCAATAGTAGTCCGCCCGCAATCTATTGTGTTTGCTCATATTCCAGACGTTGTGCTTACAGCTTGCAGTTAG 1572 0.4211 MGFQMRLLGLCLWVCFVSFNGVSALYGRGDEAVKGIVLVHGKHAIGKIDNDFVCATLDWWPPQKCDYGKCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVIYGTEDNRQPCTPFIWNPSEMFGFTQGCLPMRRWDELNSFFSKAGAKVIFGLNALAGKHVVNSSSAVGPWNYNNAESFISYTARKKYTIHGWELGNELCGNGIGTSVTASQYASDIAALRNIVQNVYREIKPKPLVIAPGGFFDANWFKEFLSHSGKTFDVATHHIYNLGAGVEDKLTEKILDPSYLDGVASTFSSLKKILQSSATSAQAWVGEAGGAYNSGHHLVSDSFVYSFWYLDQLGMSATYGTTTYCRQSLIGGNYGLLNTATFVPNPDYYSALLWHRLMGRRVLSTTFYGTKKIRAYTHCAKESNGITILLLNLDNSTTVQAEVALTFPKHPYHRGGGLFRREYHLTPKDGDLHSQIMLLNGNILTVNSAGEIPPLVPLYIDPSKPIVVRPQSIVFAHIPDVVLTACS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1859 523 PANTHER HEPARANASE-RELATED 5 441 - -
Lja4g1859 523 PANTHER HEPARANASE-LIKE PROTEIN 3 5 441 - -
Lja4g1859 523 PANTHER HEPARANASE-LIKE PROTEIN 3 455 522 - -
Lja4g1859 523 PANTHER HEPARANASE-RELATED 455 522 - -
Lja4g1859 523 SUPERFAMILY (Trans)glycosidases 48 394 IPR017853 -
Lja4g1859 523 Pfam Glycosyl hydrolase family 79, N-terminal domain 36 350 IPR005199 GO:0016020|GO:0016798
Lja4g1859 523 Gene3D Glycosidases 70 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1859 Lja-Chr4 18226459 18230489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1859 29 523 Glycoside Hydrolase AT5G61250 47.784 1.04e-178 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1859 K07964 - gmx:100778008 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1859 4 18226459 18230489 Lja4g1859 4 18226459 18230489 ECH
Lja4g1859 4 18226459 18230489 Lja6g1860 6 45935214 45938888 PCT