Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1826 ATGGACGCCGTCGCAGCCGCAGTATCAACGGCGGGAACAACCGGCTCGGTGTTGAACAAGTCCGGTAGCGGCGGTTCCGATCGGAGTGATGATAGAGGGATATTTGAGTATTTTGGTTGGGTGTATCACCTGGGAGTGAATTCGCTTGGTCATGAGTACTGTCATCTCCGATTCTTGTTCATTAGGGGGAAGCATCTTTCTATGTATAAGCGTGATCCTCATGAATACCCTTCCCTTAAACCGATTAGGCAGGGAGTTGTGGGGCCCGCGCTAATGGTGGAGGAGCTAGGTCGTCGGAGGGTCAACAATGGGGATCTTTATGTTTTGCGGTTTTACAATCGGTTAGATGAGACCAAAAAGGGAGAAATTGCTTGCGCTACAGCTGGGGAGGTTCGGGGATGGACAGAAGCATTTGATCATGCCAAGCAACAGGTTGAGTATGAGCTGTCAAGAGGAGGCAGTGCCAGGGACAAACTAAACATGGAGGCCGAGATCAATCTTGAAGGACATCGGCCTAGAGTGAGGCGGGTTTCCCATGGTTTGAGGAAGCATATAAGAATTGGCCAAGGCCCAGAAATACTGTTACGGCAATCGTCAAAGTTGGCTAGCAGGGCAGATGGGTTTCAAGGGGATAGTGGAGATGCAGTTGAAGCCTATCAATGGAAATGTGTTCTTACTGTGTCTGGTATTAGAATTTTCGAGGATGTTTCAAGTCACAAGTATGGTAAGGGTATCCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTGGTTTTGAATACTGAACGACAGAGAAGATATGAGTGGGATATGTTGATGTGTGACTTAGAGCTGGTAGATTCTTATGACGGACACTATGATGTTGTTTATGGGACATATGATCCTAAGTATCTATCTCGGTGGCATTCAAAGCAGGATTTTGTCTTCTCTAGGCAATGGTTTCGTGGACAAGATGGAACATACACTATCTTGCAGTTTCCAGCTAAACATAAGAAAAAGCCTCAAAGATCTGGATATCGACGTGCAAAGATTAATACATCTACATGGGAAATTAGAAACTTGAACACACCTATGGCATCAAATAGTCCAAAGTGTCTTGTGACCCACACTTTAGAGATACAATCTGCATCCTGGATGAGATGGAAGAACAACCGGTGCTCACAATTTGAGAGGAACATTCCTTACGCGTTATTGTGCCAAGTGGCAGGTCTGAAGGAATACATCTCAGCTAATCCAGCACTCAACCGCGAAAATGCCACCACGGTTGTTCATTCCAAAATCTCTGATGGTTCCATTTCCAGTTCTGAATATGAGGATGAAGTGCTAGATGAGTTTTATGATGCTATTAGTGCTGAATCGTCAACATCAGATGAAGAAAGCGATGATGATGAGAAACATGATCCTAAGGAGCTAAGAGTCAAACTGAAGAATATATCATGGGCAATCACAACCTTAGCTTTGAAGCGAACTGCAGCTCCTGATCTAGGCGAAGAACTGGATCCTACTGTAGCCCCTATCACAATCGATCAAAGTGACATTCATGGCTCTTTGCGCAAAGGAAAGGATGACAATGACACAAACTGTTGGACTTCTCCTAGTGGAAAAGGATTTATGATCAGGGGAAAGAACTATCTTAAAGATAATTCTAAGGTTGTTGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTTGATTGGTTCACAGTCGATAAATCTGTAGATAGAATTGCCCTGCACCCGAGATGTATGGTTCAGTCAGAAGCAGGCAAAAAGCTTCCATTTATCCTCGTCATAAATCTCCAGGTTCCTGCTAAACCAAACTACAGTCTGGTTCTATATTATGCAGCGGACAGACCGGTGCATAAAGATTCTCTATTGGCTAAGTTTGTTGATGGAAGTGATGTGTTTCGGGACTCTAGGTTCAAACTTATTCCGAGTATAGTTGAGGGATATTGGCTGGTCAAGAGAGCCGTTGGAACCAAAGCTTGCCTCTTAGGGAAAGCTGTGACTTGTAAATACTTCAAACAGGATAATTTTTTGGAGATTGATGTGGACATTGGATCATCCTCTGTAGCTAGGAGTGTCATTAACCTTGTTCTGGGATATGTCACAAACCTAGTTGTTGACCTTGCAATTTTGGTAGAGGCAAAAGACGAGAAGGAGCTGCCGGAGTACATTCTTGGAACTGTCCGGTTAAACCGTTTAAAACTTGAATCTGCTGTACCATTGGAGAAATGA 2253 0.4399 MDAVAAAVSTAGTTGSVLNKSGSGGSDRSDDRGIFEYFGWVYHLGVNSLGHEYCHLRFLFIRGKHLSMYKRDPHEYPSLKPIRQGVVGPALMVEELGRRRVNNGDLYVLRFYNRLDETKKGEIACATAGEVRGWTEAFDHAKQQVEYELSRGGSARDKLNMEAEINLEGHRPRVRRVSHGLRKHIRIGQGPEILLRQSSKLASRADGFQGDSGDAVEAYQWKCVLTVSGIRIFEDVSSHKYGKGILAKSVGVIDATADTVFEVVLNTERQRRYEWDMLMCDLELVDSYDGHYDVVYGTYDPKYLSRWHSKQDFVFSRQWFRGQDGTYTILQFPAKHKKKPQRSGYRRAKINTSTWEIRNLNTPMASNSPKCLVTHTLEIQSASWMRWKNNRCSQFERNIPYALLCQVAGLKEYISANPALNRENATTVVHSKISDGSISSSEYEDEVLDEFYDAISAESSTSDEESDDDEKHDPKELRVKLKNISWAITTLALKRTAAPDLGEELDPTVAPITIDQSDIHGSLRKGKDDNDTNCWTSPSGKGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWFTVDKSVDRIALHPRCMVQSEAGKKLPFILVINLQVPAKPNYSLVLYYAADRPVHKDSLLAKFVDGSDVFRDSRFKLIPSIVEGYWLVKRAVGTKACLLGKAVTCKYFKQDNFLEIDVDIGSSSVARSVINLVLGYVTNLVVDLAILVEAKDEKELPEYILGTVRLNRLKLESAVPLEK* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1826 750 Gene3D - 215 398 IPR023393 -
Lja4g1826 750 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 24 749 IPR045096 -
Lja4g1826 750 CDD START 220 375 - -
Lja4g1826 750 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 24 749 - -
Lja4g1826 750 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 535 740 IPR009769 -
Lja4g1826 750 SUPERFAMILY Bet v1-like 216 379 - -
Lja4g1826 750 Pfam START domain 242 374 IPR002913 GO:0008289
Lja4g1826 750 ProSiteProfiles START domain profile. 221 416 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1826 Lja-Chr4 17749598 17768344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1826 - - gmx:100801191 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1826 4 17749598 17768344 Lja4g1826 4 17749598 17768344 ECH
Lja4g1826 4 17749598 17768344 Lja6g1833 6 45665837 45678463 PCT