Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1607 ATGTGGTATAATTCATTCTGGAAATCCAGAGATCGTTTCTCCTTGGATCAACTCAGGTACTTAACTGACCAATTGACCAAAACTCAGATTGTTAATGAGGTTAACAAGGATTTTGTTATTGAGGCACTGAGATTGATTGCGGAGTTGATAATATATGGTGATCAACATGACCCGAGTTTTTTCGAATTTTTCATGGAAAAGCAAGTCATGGGCGAGTTCGTGCGGATTCTAAAACTTAGCAGGACTGTTAGTGTTCCTCTACAGTTGCTGCAAACAGTCAGCATTATGGTCCAGAATCTGAAAAGTGAACATGCTATATATTACATGTTTAGTAATGAGCATGTGAACTACCTGATAACGTATTCGTTTGACTTTCGAAATGAAGAGCTGTTGTCTTACTACATATCCTTTTTAAGAGCAATAAGTGGAAAACTGAACAGGAATACAGTTTCGCTGCTTGTGAGGACTCACGATGATGAGGTAGTTTCATTTCCACTGTATGTCGAGGCCATACGCTTTGCATTTCATGAGGAGAAAATGGTTCGCAATGCAGTAAGAGCTGTGACCCTGAATGTTTATCATGTTGGAGATGACTCTCTTAATAGATATATAACCAGGGAACCTCACACGGATTACTTCTCGAACCTGGTTTCATTTCTTAGGAAGCAGAGCATGGATTTAAGTAGACTGGTCTCTACTGCCCTGACAAATCCAGGCCCAGATTCAACCTCTACTGTTGTTGATGCTGTAGATGAAATTGAGGATAATCTATACTACCTTAATGATGTTGTCTCTGCTGGAATTCCTGATGTTGGGAGGATAATTACAGACAGTATTCTGATGGTTTTGATATTTCCAATTCTTCTTCCTTCCATGAAGATTGTGGTTGATAAGGACATCCAAAGTGGTGTTGTCACGTCTCTGTACTTACTTTGTTGCATCCTGAGGATTGTCAAAATCAAAGATTTGGCAAATACCATAGCTGCTGCTCTTTGTTATCCCTCAGAGGCCTTTGCAAAAAGTTCTGGGGGTAATTTCAATGGCCATACATCTGATCATGATTTCACATCTGAATACCAAGTGTCAGATAATGATAATCTTACCAAGCGTGATACAATACACTCAATGGTTGATGTTCCACGCTCTTCTAGTTCTTCAGGTTATCAAACAGAAGGTGTTCTTATTCCAAAAGATTCTAGCAGTTCAAATTTGTCTTTAAGGGAGGTTTTGCTTGCATATGTTACAAAAGGAGATGATATCCATGTTTTGGGCTCTTTAGGCATGCTTGCAACTCTGCTGCAAACTAAAGAACTTGATGAATCAATGCTAGACGTGCTGGGGATTCTTCCACAACGCAAACAACACAAGAAACTCTTATTGCAAGCTTTAGTTGGTGAGGGTTCAGATGAAGAACAACTGTTTTCTACCAGAAGTAGCTTAACTAGGGATGGAATTGGCAGTGTTCTTGATGTCTATCATGAAAAGATCAAGGAACAGTATGGGGTCTCTTTTCAGTCTTCTGATGTGGGAATAAGCCCTGAAGTACATAGATTTCAGGTGATTGATGCATTAGCGAACCTCTTTTGCCGGTCTAATGTATCTGCGGCGACACTATGGGACGGTGGTTGGCTTGTACGCCAGCTGTTTCCTTATAGCGAGTCAGAATTCAACAGCCATCACCTTCAATTACTGAAAGTTTCTTACAAGAATTGTTCTTCTGCTCTTGTTGAGGAGGTTAATGGTATCTGGCCTGACTTTCTTATTCCTGTTCTATGTGATGAATGGAGAAAGTGCAAAAGAGCAATGGAGTCGTCATCTCCTCGGAAAGAACCGGATTGCATGCTTGGGCTACAACGAAAGTTCTCTTCAGAAGACAGCATTCCACACAGGTCATCTTTGGCTGCTGGAGAAAGAATGCACGAGTTGGTGAAGGTATTTGTACTACAACACCAACTTCAATTATTCACTCTTGGTAGAGCTTTACCCGAGCAACCTCCAATTAATCCTCCTGGTGATCTCCCTACAAACTGTCGTGCCCATACTTCTGGGATTGCCGCGTCAGGCCCGAAGGCTGGCACTGAAGTTTGCATTGTTAATGCCGTGCGTTGTAGAATATGCTTTGAGAGGGGTAAAGAGCGACACTTATGCTTTATAGCAATGTCTTTAGGAGTATCTGGTTGGATTATTCTGGCAGAAGAGTTGCCACTGAAGACGTCCTATGGAGTCATTCGGGCTGTTGCACCTTTGGCTGGATGCGATCCCAGGATTGATGATGATCACTCAACATGGCTACACTTGTGGATCCGTTCATCCTCTTTACCATTTCTAGATCCTGCCAAATTCAATGGTTACGGGAAAATGAAAAGAAAAGGTTTAGTAGATGGAAGATGGACATTGGCGTTCAGGGATGAGGAGTCTTGCAAGTCTGCTTTATCCATGATTGCTGAAGAGATCAATTTTCTGAGTGATGAGGTTCATAGAAGACTAAGGCCTTTGCTCAACCTTGAAACTGCAACAGATCCATCAAGCTCGCCTGCAGATGACACCCCTTTGTATAAAACACTTCAAAATCCATTGTAA 2580 0.4155 MWYNSFWKSRDRFSLDQLRYLTDQLTKTQIVNEVNKDFVIEALRLIAELIIYGDQHDPSFFEFFMEKQVMGEFVRILKLSRTVSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEHVNYLITYSFDFRNEELLSYYISFLRAISGKLNRNTVSLLVRTHDDEVVSFPLYVEAIRFAFHEEKMVRNAVRAVTLNVYHVGDDSLNRYITREPHTDYFSNLVSFLRKQSMDLSRLVSTALTNPGPDSTSTVVDAVDEIEDNLYYLNDVVSAGIPDVGRIITDSILMVLIFPILLPSMKIVVDKDIQSGVVTSLYLLCCILRIVKIKDLANTIAAALCYPSEAFAKSSGGNFNGHTSDHDFTSEYQVSDNDNLTKRDTIHSMVDVPRSSSSSGYQTEGVLIPKDSSSSNLSLREVLLAYVTKGDDIHVLGSLGMLATLLQTKELDESMLDVLGILPQRKQHKKLLLQALVGEGSDEEQLFSTRSSLTRDGIGSVLDVYHEKIKEQYGVSFQSSDVGISPEVHRFQVIDALANLFCRSNVSAATLWDGGWLVRQLFPYSESEFNSHHLQLLKVSYKNCSSALVEEVNGIWPDFLIPVLCDEWRKCKRAMESSSPRKEPDCMLGLQRKFSSEDSIPHRSSLAAGERMHELVKVFVLQHQLQLFTLGRALPEQPPINPPGDLPTNCRAHTSGIAASGPKAGTEVCIVNAVRCRICFERGKERHLCFIAMSLGVSGWIILAEELPLKTSYGVIRAVAPLAGCDPRIDDDHSTWLHLWIRSSSLPFLDPAKFNGYGKMKRKGLVDGRWTLAFRDEESCKSALSMIAEEINFLSDEVHRRLRPLLNLETATDPSSSPADDTPLYKTLQNPL* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1607 859 Pfam Uncharacterised conserved protein 43 193 IPR019155 -
Lja4g1607 859 PANTHER PROTEIN TRANSPARENT TESTA 9 1 843 - -
Lja4g1607 859 MobiDBLite consensus disorder prediction 836 859 - -
Lja4g1607 859 PANTHER UNCHARACTERIZED 1 843 IPR039272 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1607 Lja-Chr4 15066886 15076740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1607 K19513 - gmx:100786267 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1607 4 15066886 15076740 Lja4g1607 4 15066886 15076740 ECH
Lja4g1607 4 15066886 15076740 Lja6g2087 6 49399738 49410029 PCT