Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1532 ATGGCTTCAACCTCTGCTGTTTCTATGGCTCTGCCACCAACCTACGCCGGCCAGAAGAGGGTGGTGCCAAGCTCTGAGGCATTCTTGAAGGCACCATTGCCTCTGCGGCCTTCAAAGGGTGTGGCAGCATCAAAACCCAACGGGAGGTTTCAAGTGAAGGCATCCTCCTCCATGAAAGAGAAAGTTGTGACAGGGCTGACAGCAGCTGCATTGACAGCTCAGATGATGGCTCCGGACGTGGCTGAAGCTGCTTCTGTTTCACCTTCTCTGAAGAACTTCTTGCTCAGCATCGCCGCCGGTGGCGTTGTGGCTGTAGCCATTGTTGGTGCTGTGATTGGTGTCTCCAATTTCGACCCTGTTAAGCGAAGCTGA 372 0.5403 MASTSAVSMALPPTYAGQKRVVPSSEAFLKAPLPLRPSKGVAASKPNGRFQVKASSSMKEKVVTGLTAAALTAQMMAPDVAEAASVSPSLKNFLLSIAAGGVVAVAIVGAVIGVSNFDPVKRS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1532 123 PANTHER EXPRESSED PROTEIN 1 123 - -
Lja4g1532 123 PANTHER OS07G0673550 PROTEIN 1 123 - -
Lja4g1532 123 Gene3D Single helix bin 85 123 - -
Lja4g1532 123 Pfam Photosystem II reaction centre X protein (PsbX) 86 123 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1532 Lja-Chr4 14291662 14292531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1532 - - gmx:100306291 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1532 4 14291662 14292531 Lja6g2018 6 48269430 48269789 PCT