Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1468 ATGGCGTCGTCAGAGAATGAAGCTTCTCACTCTCCTCCTGCTCCTGCTTCTCAAGTTTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGGCACATTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAGCTAAACTTGCGTGAAGATCCCACCACATATACAGAAAGAGAATGTTCTGATCTTTTGAGACGGGTACATGAGGGGAACAAATCCACGGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTGTATGGCGTCTCGAAGACTGAGATGATTCCATTGCCAAATTCTTCAGTTGGGTCTAGCATCATCAATTCTAAAATTGAGAACAGGTACAAGAAGCTCCTATGCACAGTCGACCTTACAAAGGATTTCTTTTTTAGCTACTCATACCACGTTATGCGTAGTCTTCAAAGGAACTTTTGTGATAATGAGACAAGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTCTTAACACGAGGAATTAGGAATCACCTCCAGAACACTACTTGGACTGTTGCACTAGTTTATGGCTTTTTTAAACAGGACACACTCATGATATCTGGACGGGAGTTCATACTCACGCTAATCGCTAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCAAACGATGTTGAGACAGAACAAATGGTCTTTGAGCATGTTCCGGAAGGTCTTCCAATCAAAATTAGCTCTATTATCCAGAACCGTGGTTCAATCCCTCTATTTTGGTCACAAGAGACTTCACGTCTAAATATTAAACCAGATATTATAGTGTCAAAGAAGGATGAGAATTATCAAGCCACCAGACTTCACTTTGAAAATCTTGTCAAGAGATACGGGAATCCCATAATAATTTTGAATCTCATAAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGAACTGAATTTGCTAATGCCATAGATTTCATTAATAAAGATTTGCCTGAGGAGAACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTGTTGCAGCTTCTGGGCAAAGTGGCTGCGTATGCGTTGACATTAACTGGTTTTTTCTATTGCCAAGCTACATCAACCTTGAGATCAGAGGACTGTCTAAATTGGCCACCTACGGAAAATGTTGATAAGGGAAGTGATTCACCTACTAGTCATTTTGATTGTGATAATGAGGATGCTGATCATTTAGAGAGAAAACCGAGTGAAGGAAACAATGTTTCAAATGCAAATCATTGTGTCAAACCACAAATGTTGCATAGACTGCAAAGGGGGGTCCTCAGGACCAACTGCATAGACTGCCTGGACCGCACAAATGTTGCGCAATATGCATATGGGTTGGCTGCTCTTGGCAACCAGCTTCACGCGCTAGGAGTTATTGACCACCCAAGAATTGACCTTGATGACCCAGTAGCTGATGATTTGATGAAGTTTTATGAGCGGATGGGCGACACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGCCAATGGAGGGCTGCAACACAGTCTCAGGAGTTTTTCAGGACACTTCAGCGTTATTACAGCAATGCTTACATGGATGCTGTGAAACAAGATGCAATTAATGTATTCCTGGGGCATTTTCAACCACAACTGGGCAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCACTACGATACAGGGAGGCTTGGAGATGATGATGCAAGGTCGATTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTCGTGAAATTTCTACACCTATGTCAGCTCCAAATGCCAAGCAAGAGAACTTCTCAAACCGTCATTTACCAGACCGATCACAAGAAAAAAACAAAGCTCTTTGCGAGTCATCACCTGAAATATCTTCTACTGAGAGTGACATTGCATTTTCAAGGTACACTCCTTCTTTGCCTCGGAGACAGCTTTTTGGAGAGATGCAAAGAGAGCGCAGCCTTGAAGGTGATCATATATATTATTCTGAGCATGGGGATTCCTTTAGCTGCTCCAACTTTGTTGACCTGGATTGGTTATCTTCTTCTGGAAATTCATGTGAAGAAGAGCAATTTGAGAGGTCATCCATAACCAACTCTCCGATTGCTGGTGTTTCTACGGAAAATGTTATCAGTGGGGTGATGGTAGGGGAAACAACTGTCTCCACTAGTGATCTGGGCGGCTCTAGCCTGAAGGGAAGGGAGCAAACGGAATCGAAGTTATCCTACAACAACGGACGGTCCAACACGCCAGAGGAATTTCCAGATACTTTTGTGAACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2511 0.4301 MASSENEASHSPPAPASQVCMQKFRLYETRSNFYMIGRDKSRAHWRVLKIDRLDPSELNLREDPTTYTERECSDLLRRVHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYGVSKTEMIPLPNSSVGSSIINSKIENRYKKLLCTVDLTKDFFFSYSYHVMRSLQRNFCDNETSHVLYETMFVWNEFLTRGIRNHLQNTTWTVALVYGFFKQDTLMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQMVFEHVPEGLPIKISSIIQNRGSIPLFWSQETSRLNIKPDIIVSKKDENYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRTEFANAIDFINKDLPEENRLRFLHWDLHKHFQSKATNVLQLLGKVAAYALTLTGFFYCQATSTLRSEDCLNWPPTENVDKGSDSPTSHFDCDNEDADHLERKPSEGNNVSNANHCVKPQMLHRLQRGVLRTNCIDCLDRTNVAQYAYGLAALGNQLHALGVIDHPRIDLDDPVADDLMKFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAVKQDAINVFLGHFQPQLGKPALWELGSDQHYDTGRLGDDDARSIFKRSFSDGNILREISTPMSAPNAKQENFSNRHLPDRSQEKNKALCESSPEISSTESDIAFSRYTPSLPRRQLFGEMQRERSLEGDHIYYSEHGDSFSCSNFVDLDWLSSSGNSCEEEQFERSSITNSPIAGVSTENVISGVMVGETTVSTSDLGGSSLKGREQTESKLSYNNGRSNTPEEFPDTFVNWVTYGQTLCH* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1468 836 MobiDBLite consensus disorder prediction 668 682 - -
Lja4g1468 836 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 1 836 - -
Lja4g1468 836 Pfam SacI homology domain 96 393 IPR002013 GO:0016791
Lja4g1468 836 MobiDBLite consensus disorder prediction 437 473 - -
Lja4g1468 836 MobiDBLite consensus disorder prediction 788 815 - -
Lja4g1468 836 ProSiteProfiles Sac phosphatase domain profile. 160 556 IPR002013 GO:0016791
Lja4g1468 836 MobiDBLite consensus disorder prediction 445 466 - -
Lja4g1468 836 MobiDBLite consensus disorder prediction 659 689 - -
Lja4g1468 836 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 836 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1468 Lja-Chr4 13512929 13522970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1468 3 836 Acyl Lipid Metabolism Gene Families AT5G20840 61.237 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1468 K22913 - gmx:100810079 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1468 4 13512929 13522970 Lja4g1468 4 13512929 13522970 ECH
Lja4g1468 4 13512929 13522970 Lja6g1963 6 47516307 47527397 PCT