Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1382 ATGAATCCATTACCTCTTATCTTCATCACTCTTGTCATAGCAGCAACAATCTCAGTACCAGTGAGTCACTGCAGAATTATGCAGCTAAAAGGCACCAATCTGATTGAAGAAACTTGCAAGCAAACACCCCATCATGATCTTTGCATTCACTACCTCAAATCTGACCCTCAAAGCTCTAAAAAAGATGTCACAGGGCTAGCACTGATCATGATCAACACAATGAAAACCCAAGCAAACAATGCCTTAGACAAGATCCATCACCTTCTTCTTCAGGGGAGTTCTGAGCCTGCTCTGAAGCAAGCACTGAATGAATGTGCTGGCAGATATAGAGCAATTGTGGAAGCTGATGTGGCACAAGCTAATGCAGGTTTGCAGAAAGGGGACCCCAAGTTTGCTGAAAATGGTGCCAATGATGCAGCCATTGAAGCTACCTCTTGTGAGAAAAGTTTTGAAGGGAAAAAATCACCACTCACTAATGATAACAATGCTATGCATGATGTAGCAGATATAACAGCAGCTATTGTCAGATTATTGCTCTAA 540 0.4204 MNPLPLIFITLVIAATISVPVSHCRIMQLKGTNLIEETCKQTPHHDLCIHYLKSDPQSSKKDVTGLALIMINTMKTQANNALDKIHHLLLQGSSEPALKQALNECAGRYRAIVEADVAQANAGLQKGDPKFAENGANDAAIEATSCEKSFEGKKSPLTNDNNAMHDVADITAAIVRLLL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1382 179 Pfam Plant invertase/pectin methylesterase inhibitor 33 174 IPR006501 GO:0004857
Lja4g1382 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 179 - -
Lja4g1382 179 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 16 179 - -
Lja4g1382 179 CDD CIF_like 32 178 IPR034087 GO:0004857|GO:0043086
Lja4g1382 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 178 IPR035513 -
Lja4g1382 179 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 178 IPR006501 GO:0004857
Lja4g1382 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 179 IPR035513 -
Lja4g1382 179 SMART PMEI_2 30 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1382 Lja-Chr4 12355887 12356775 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1382 - - gmx:100306719 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1382 4 12355887 12356775 Lja4g1382 4 12355887 12356775 ECH
Lja6g2767 6 56775936 56776490 Lja4g1382 4 12355887 12356775 PCT