Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1381 ATGAAAAGTAACTCAACCTCTGTTCTCTCTGTTCCTCTCCACACCCTTCTTGTATCTTTTCTTCTCTTCACACTCACACATTCCTCTACTCTTGTCAAAGATGGTGGAGATGGTGGTGATTTGGTGGACCAAATATGCAAAAAGACACCCTTTTATGATCTCTGCAGCACAATCCTCCACTCAAATCCTCTAACTCCAAAGACTGATCCAAAAGGCATGGCCCTCATCATGGTCAACAACATTCTAGCAAATGCCACTGACACTCTTAATTACATTGAAATGTTGATTAAGCAAACCTCAGATCAACAGTTGGAGCAGCAATTAGCATTTTGTGCTGAGTCATACATCCCAGTTGTGAAGTACATTCTCCCACAAGCTGCTGATGCTATAAACCAAGGTAGATTTGGGTTTGCAAATTACTGCATATTTGATGCTGAGAAGGAATTGGATGCTTGCAACAAGAAATTCTCAGGCTCAGCAAAATCACCATTAGGTGATAGAACTAGCATTGTGCAACAGCTGGTGGATGTGGCTGAAGCTATAGTCAAACTATTAATACATGGCTGA 567 0.4127 MKSNSTSVLSVPLHTLLVSFLLFTLTHSSTLVKDGGDGGDLVDQICKKTPFYDLCSTILHSNPLTPKTDPKGMALIMVNNILANATDTLNYIEMLIKQTSDQQLEQQLAFCAESYIPVVKYILPQAADAINQGRFGFANYCIFDAEKELDACNKKFSGSAKSPLGDRTSIVQQLVDVAEAIVKLLIHG* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1381 188 Pfam Plant invertase/pectin methylesterase inhibitor 40 181 IPR006501 GO:0004857
Lja4g1381 188 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 186 IPR035513 -
Lja4g1381 188 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 185 IPR006501 GO:0004857
Lja4g1381 188 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 188 - -
Lja4g1381 188 CDD CIF_like 41 185 IPR034087 GO:0004857|GO:0043086
Lja4g1381 188 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Lja4g1381 188 SMART PMEI_2 37 181 IPR006501 GO:0004857
Lja4g1381 188 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1381 Lja-Chr4 12352821 12353600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1381 - - gmx:100788167 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1381 4 12352821 12353600 Lja6g2767 6 56775936 56776490 PCT