Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0548 ATGACCTCAACCAATTTCACCGGTTTCATCTTGGCCGTGGTTTCCAGTGCTTTCATCGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTTCAACTCGCCGGTGTTAACGGTCCTCGTGCCAGTGTTGGTGGCTATGGTTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGATTACCATGATTGTTGGAGAGATAGCGAATTTCGTTGCATACATTTACGCCCCGGCTGTGCTTGTTACTCCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCTTAGCGCATTTCCTCTTGGAGGAGAAGCTGCAGAAAATGGGCATGCTGGGGTGTCTTCTATGCATTGTGGGATCTACTGTTATTGTGCTCCATGCTCCTGAAGAGATGTCTCTTAGTTCTGTGCAAGAAATTTGGGAACTGGCCGTTCAACCCGCGTTCCTCTCGTACACGGCCGCAGCCATTGCCGTGACATTGGCTCTTGTTTTGTATATTGCGCCCCGCTTTGGCCAGACTAATATTTTGGTTTATGTTGGAATATGCTCTGTAATTGGGTCCTTAACTGTCATGAGTGTGAAAGCAATTGGCATTGCAATGAAACTTACATTAGAAGGCGCAAACCAGTTTTTCTACTTTCAGACATGGATTTTTTCTACGGTTGCTATTACCTGCATCATTATCCAGCTAAATTACCTTAATATGGCACTGGATAACTTTAATGCAGCAGTTGTTTCTCCAATCTATTATGCATTGTTCACAGCTTTTACAATATTAGCCAGTTTAATCATGTTTAAGGACTATTCTGGTCAAAGTATAAGCAGTATTGTGTCAGAGTTATGTGGTTTCATCACTGTTTTATCTGGAACAACTGTATTGCACAGTACAAGAGAACCGGATCCTCCAGCCATTACAGATTTATATACACCATTGTCTCCTAGAGTATCATGGTATATCCAAGGCAATGGTGAACCCTGGAAACAGAAAGAGGAAGATGTTCCACCCATTAATTTAATCACAATTATACGGCAAGATCATTTCAAGTGA 1038 0.4268 MTSTNFTGFILAVVSSAFIGSSFIIKKKGLQLAGVNGPRASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLEEKLQKMGMLGCLLCIVGSTVIVLHAPEEMSLSSVQEIWELAVQPAFLSYTAAAIAVTLALVLYIAPRFGQTNILVYVGICSVIGSLTVMSVKAIGIAMKLTLEGANQFFYFQTWIFSTVAITCIIIQLNYLNMALDNFNAAVVSPIYYALFTAFTILASLIMFKDYSGQSISSIVSELCGFITVLSGTTVLHSTREPDPPAITDLYTPLSPRVSWYIQGNGEPWKQKEEDVPPINLITIIRQDHFK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0548 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016021
Lja4g0548 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
Lja4g0548 345 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 345 - -
Lja4g0548 345 PANTHER UNCHARACTERIZED 1 345 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0548 Lja-Chr4 4496133 4500809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0548 K22733 - gmx:100799756 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4423 1 57429645 57433857 Lja4g0548 4 4496133 4500809 ECH
Lja4g0548 4 4496133 4500809 Lja4g0548 4 4496133 4500809 ECH
Lja4g0548 4 4496133 4500809 Lja1g4423 1 57429645 57433857 PCT