Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4423 ATGTACTCAAGCAATTTGATCGGGTTCGTGTTAGCTCTTGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACGCGCCGCCACCCTCAGCGGCTCTCGCGCCAGTGGTGGTGGCTATGGTTATCTCCTTCAACCTCTTTGGTGGTTTGGAATGGTTACTATGATTGTTGGCGAGATTGCGAATTTTGTTGCCTACATTTATGCCCCTGCGGTGCTTGTTACTCCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCCTGGCACATTTCATGTTGGGGGAGAAGCTGCAGAAGATGGGTATGCTAGGGTGTCTTCTCTGTATAGTGGGGTCCACTATGATTGTGCTCCATGCGCCTCAGGAAAAGTCTCTTAGTTCTGTGCTGGAAATATGGCAATTGGCTGTTCAACCAGCATTTCTTATGTACACAGCTTCAGCAATGGCTGTAACATTCTTTCTGATTTTGTATTGTGCTCCCCGCTATGGCCAGACTAATATTTTTGTGTATATTGGAATATGCTCCATAATTGGATCCTTAACTGTCATGAGTGTAAAAGCAATTGGCATTGCTATAAAACTTACATTGGATGGTGCAAACCAGTTTTTCTACATTCCGACATGGATTTTCACAACGGTTGCTATTTCCTGCATCATTACTCAATTAAATTACCTTAATATGGCTCTGGATATTTTCAACACAGCAGTTGTTTCTCCTATCTATTATGCCTTGTTCACATCTTTTACAATATTAGCTAGCGCAATCATGTTTAAGGATTATTCTGGTCAAAGTATAAGCAATATTGCATCAGAGCTTTGTGGCTTCATCACTGTTTTATCTGGAACAGCCGTACTGCACAGTACAAGAGAACCAGATCCTCCAGACAGTACAGATCTTTACAGTCCCTTGTCTCCAAAAGTATCATGGTACATCCAAGGCAATGGCGAAACTTGGAAACAGAAGGAGGAAGATGAACAACCCTTCAGTTTAATCACAGTTATTCGGCAAGACCATTTCAAGTGA 1041 0.4275 MYSSNLIGFVLALVSGAFIGSSFIIKKKGLQRAATLSGSRASGGGYGYLLQPLWWFGMVTMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLGEKLQKMGMLGCLLCIVGSTMIVLHAPQEKSLSSVLEIWQLAVQPAFLMYTASAMAVTFFLILYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTLDGANQFFYIPTWIFTTVAISCIITQLNYLNMALDIFNTAVVSPIYYALFTSFTILASAIMFKDYSGQSISNIASELCGFITVLSGTAVLHSTREPDPPDSTDLYSPLSPKVSWYIQGNGETWKQKEEDEQPFSLITVIRQDHFK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4423 346 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 346 - -
Lja1g4423 346 PANTHER UNCHARACTERIZED 1 346 IPR008521 GO:0015095|GO:0015693|GO:0016021
Lja1g4423 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 125 - -
Lja1g4423 346 Pfam Magnesium transporter NIPA 5 296 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4423 Lja-Chr1 57429645 57433857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4423 K22733 - gmx:100783541 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4423 1 57429645 57433857 Lja4g0548 4 4496133 4500809 ECH
Lja1g4423 1 57429645 57433857 Lja1g4423 1 57429645 57433857 ECH
Lja4g0548 4 4496133 4500809 Lja1g4423 1 57429645 57433857 PCT