Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0542 ATGCAAGAGACGCTCCTCACACTCTCCGTCTCCCACCAAGACATTCTCCTTCACCCAAACCCCCAAGCACCCAAGAAGAAAAAATCCCAACCACGCCACAAGCACCGAGCAGGACCCACCGCCGACAACTACCTCATCGTCCCGTCTCCGTGTCCGGCGCCCTCACGGAACAGAACCCAACCTCGCCGCGTCAGCCCCGCCGTCTCACCTCCCTCCTCCGCCGCGGAGAAGGCCCTTCCGAACGGCGACATCTACACCGGAACGCTGTCGGGGAACGCGCCGCACGGTACCGGGAAGTACCTCTGGTCCGATGGGTGCATGTATGAGGGGGAGTGGAGGAAAGGGAAAGCGTGCGGGAAGGGGAGATTCTCGTGGCCTTCTGGAGCTACCTACGAGGGGGAGTTCAAATCGGGTCGGATGGAAGGGTTCGGGTCCTTCATCGGCGTCGACGGTGATATGTACCGTGGGTCGTGGCTTGCTGACCGGAAGCATGGGTTAGGGGAGAAGCGGTATGCTAATGGGGATGTGTATGAAGGGTGGTGGAGGTGCAACCTGCAAGATGGTGAAGGAAGGTATGTGTGGAAGAATGGGAATGAGTATGTAGGAGAGTGGAAGTGTGGTGCTATTTGGGGAAATGGGGTTTTGGTTTGGGCGAATGGGAATCGTTATGAAGGGTGTTGGGAGAATGGGGTGCCTAAAGGGAAGGGAGTTTTCACTTGGTGTGGTGGGGGTTTGGGGAAGGAGCTGGTGAATGTGGTGGAGGGGGAGGAGGAGAAGCAGTGTCAGGTGATGGCGGCGGCGAGGAAGAGGTCTTCGGTGGATGGTTCAAGGAGTGTGAGTTTTCCCAGGATTTGCATTTGGGAACTTGATGGAGAAGCTGGGGACATTGTCTGTGACATTGTTGACAATGTGGAAGCTTCTATGTTTTACAAGGATGGTAGTGAATCAGAAAACAGTGGAGAAGGTTATGGTGTGTTGCACAAGACTCCTTGTTGGTCTGTTGATGGTGATGTCAAGAAGCCAGGTCAAACTGTTTCCAAGGGACACAAGAACTATGATCTCATGCTCAGTCTCCAACAGGGTATCAGGTTCACTGTTGGCAAGTATGTTTCTATTATGCGAGAGCTTAAGCCCGGGGATTTCGATCCCAGAGAGAAATTCTGGACAAGGTTGCCGCAGGAAGGTACCAAGTTTCCACCTCCATACCAGTCTTTGGACTTTAGGTGGAAGGATTACTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTACGGATTACATGCTTGCTATTTGTGGAAGTGACACACTCAGAGAAATGTCTTCTCCTGGCAAGAGTGGAAGCATCTTTTACCTCACTCAAGATGACCGGTTCATAATCAAGACAGTGAAGAAGTCTGAAGTCAAGGTGCTGATCAGGATGCTTCCAAGCTACTACCAACATGTTTGTCAATACAAGAACACCTTGGTAACAGCATTCCTGGGGGTTCATTGTGTCAAGCCTGTTGGAGGTCAAAAGACCAGGTTTATTGTGATGGGCAATGTGTTCTGTTCGGAGTATCGGATCCATAGGAGGTTCGACCTCAAAGGTTCTTCTCATGGTCGAACAACAGATAAACCCCAGGAGCAGATTGACGAGACCACCACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAACAGTCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGCGAGTTCCTGGAAGCCGAGGGAATCATGGACTACAGTCTTCTGATTGGCCTTCATTTTCGTAATGATCACTCAGCTGACGGAATGAAAAGTTCAGGCAAGAGAGACTTGCATGATGATGAGATGCACTTATGCCGGGGACCTCTAATCAAGCTGGGAATGAACATGCCTGCCAGAGCTGAAAGAGTATCTGGTAGTGGAAGTGGCAATTCTACCCTTTCAGAGAATAGCAGTGAGATCTCTGATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGGCTATGATATTGGCAAAAAGATAGAACATGCATACAAGTCACTACAAGTGGACCCCACCTCCATCTCAGCCGTTGATCCAAAGCTATACTCCAAAAGGTTCAGGGATTTCATACACAGAATCTTTGTAGAGGACAAATGA 2163 0.4988 MQETLLTLSVSHQDILLHPNPQAPKKKKSQPRHKHRAGPTADNYLIVPSPCPAPSRNRTQPRRVSPAVSPPSSAAEKALPNGDIYTGTLSGNAPHGTGKYLWSDGCMYEGEWRKGKACGKGRFSWPSGATYEGEFKSGRMEGFGSFIGVDGDMYRGSWLADRKHGLGEKRYANGDVYEGWWRCNLQDGEGRYVWKNGNEYVGEWKCGAIWGNGVLVWANGNRYEGCWENGVPKGKGVFTWCGGGLGKELVNVVEGEEEKQCQVMAAARKRSSVDGSRSVSFPRICIWELDGEAGDIVCDIVDNVEASMFYKDGSESENSGEGYGVLHKTPCWSVDGDVKKPGQTVSKGHKNYDLMLSLQQGIRFTVGKYVSIMRELKPGDFDPREKFWTRLPQEGTKFPPPYQSLDFRWKDYCPMVFRHLRELFAIDPTDYMLAICGSDTLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPSYYQHVCQYKNTLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHRRFDLKGSSHGRTTDKPQEQIDETTTLKDLDLNFVFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSLLIGLHFRNDHSADGMKSSGKRDLHDDEMHLCRGPLIKLGMNMPARAERVSGSGSGNSTLSENSSEISDVILYFGIIDILQGYDIGKKIEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0542 720 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 50 720 IPR023610 -
Lja4g0542 720 SMART PIPK_2 377 717 IPR002498 GO:0016307|GO:0046488
Lja4g0542 720 MobiDBLite consensus disorder prediction 1 16 - -
Lja4g0542 720 Pfam MORN repeat 154 176 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 223 244 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 131 153 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 177 198 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 108 129 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 200 222 IPR003409 -
Lja4g0542 720 Pfam MORN repeat 85 107 IPR003409 -
Lja4g0542 720 SUPERFAMILY SAICAR synthase-like 347 716 - -
Lja4g0542 720 CDD PIPKc_AtPIP5K_like 351 715 - -
Lja4g0542 720 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 436 715 IPR002498 GO:0016307|GO:0046488
Lja4g0542 720 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 337 518 IPR027484 -
Lja4g0542 720 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 80 184 - -
Lja4g0542 720 Gene3D - 519 716 - -
Lja4g0542 720 Gene3D - 115 159 - -
Lja4g0542 720 Gene3D - 76 114 - -
Lja4g0542 720 Gene3D - 160 212 - -
Lja4g0542 720 PIRSF PIP5K_plant 52 247 IPR017163 GO:0005524|GO:0016308
Lja4g0542 720 PIRSF PIP5K_plant 609 720 IPR017163 GO:0005524|GO:0016308
Lja4g0542 720 PIRSF PIP5K_plant 245 624 IPR017163 GO:0005524|GO:0016308
Lja4g0542 720 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 50 720 - -
Lja4g0542 720 SMART morn 106 127 IPR003409 -
Lja4g0542 720 SMART morn 129 150 IPR003409 -
Lja4g0542 720 SMART morn 175 196 IPR003409 -
Lja4g0542 720 SMART morn 221 242 IPR003409 -
Lja4g0542 720 SMART morn 198 219 IPR003409 -
Lja4g0542 720 SMART morn 83 104 IPR003409 -
Lja4g0542 720 SMART morn 152 173 IPR003409 -
Lja4g0542 720 MobiDBLite consensus disorder prediction 1 81 - -
Lja4g0542 720 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 346 716 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0542 Lja-Chr4 4446649 4450996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0542 45 719 Acyl Lipid Metabolism Gene Families AT1G21980 63.978 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0542 K00889 - gmx:100789188 1123.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0542 4 4446649 4450996 Lja1g4415 1 57286496 57291510 PCT