Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4415 ATGCAGGAAACGCTGCTCACTCCGTCGGAGCAGCAGCAGCACCACAGTAATGCAGGGAACAAAGAAGCCGGAGAAGAAGAGAAGAACAGGGAAATCGTACTGGTGCCATTACCGCCGTGCCGTCGACCACCGCGGACACGGCGCGTGTCGCCGGTGGAGAAGGAGCTCGGGAACGGCGACGTGTACAGCGGGAGCCTCTGCGGGAACGTGCCGCACGGGAGGGGGAAGTACGTGTGGTCAGACGGGTGCATGTACGAAGGCGAATGGAAGGGCGGAAAGCCGTGGGGGAAAGGGAGGTTGTCATGGCCGTCGGGCGCCACCTACGAGGGGGAGTTCGTCTCCGGTCAGATTTCGGGTCAAGGCACATTCGTCGGGTCGGAGGGGGAGACCTACCGCGGGTCGTGGGTTTCAGACAGGAAGCACGGGTTGGGGGAGAAGCGGTACGGTAACGGCGATGTCTACGAAGGGTGGTGGCGGTGCAACCTGCAGGAGGGTGAGGGGAGGTACGTGTGGAAGAATGGAAGCGAGTATGTGGGGGAGTGGAAGGGTGGAGCTATGACGGGGAATGGTGTTCTGGTGTGGCGGAACGGGGACCGTTACGACGGGTTTTGGGAGAATGGGGTTCCGAAGGGGAATGAAGAGGAAGAGAGGGGTGTGATTGTGAAGAAGAGGGTGTCAGTGGATGGTTCCAAGAGTGTGGATTTTCCCAGGATTTGCATTTGGGAGCTTGATGGTGAAGCTGGAGATATCACTTGTGACATTGTGGAAGCGCCTATGTTTCACAGGGAAGTTGGTAGTGGTAGTGAATCAGAGAATGGGGGTGGTTTTGAACAGTTTCAGAGAAGCCCTGTTTGTTCTATTGATGGAGGAGATGTTAAGAAACCTGGTCTTACTATTTCCAAGGGGCATAAGAACTATGATTTGATGCTTAATCTTCAATTGGGAATTAGATATTCTGTCGGGAAACAGGCTTTGGTGCTGCGAGAGCTTAAGCCAGGGGATTTCGATCCGAAGGAGAAGTTTTGGACGAGGTTCCCTTCAGAAGGGTCTAAGGTTACACCGCCGCATCAGTCAGTGGACTTCAGGTGGAAAGACTACTGTCCTGTGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCTGGCTATTTGCGGCAATGACGCGCTTAGAGAAATGTCTTCTCCTGGCAAAAGCGGAAGCTTCTTTTACCTCACTCAGGATGATCGGTTTATTATCAAGACCTTGAAGAAGTCTGAAGTCAAGGTGCTCATTAGGATGCTTCCAAGTTACTATCAGCATGTTTCTCAGTACAAGAACTCTCTTGTTACAAAATTCCTAGGCGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACACGGTTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGGATTCATAAGCGGTTTGATCTTAAAGGTTCTTCTCATGGTCGGACAGCCGATAAACCACAGGAGGAGATTGATGAGACTACCACTCTTAAAGACCTTGATCTTAGTTTTCTCTTTTGCTTGGAACAGTCTTGGTTTCAAGTGCTTAAATGGCAACTTGACAGAGACTGTGAATTCCTGGAAGCAGAGGGGATAATGGATTACAGTTTTCTGATTGGCCTTCATTTTCATGATGATTACTCAGGTGATGAATTAAAAAGTTCACGGAATGAGTTGTGCTCAGATTTTTCAGCCAAGAGAGATATGAAAAATGACGACATGCAGGATATGAGATGGATGCCTATAGGCCGGGGACCTTCAATCCGGCTAGGAATAAACATGCCTGCCAGAGCCGTGAGAGTGTGTAAAACTAGACTGGATCAGCACACAATTACTGGAAGTAGCAATTCTACCCCTTCAGAGAGTAGTGGTGAGATTTCTGATGTAATCCTCTATTTTGGTATCATTGATATTCTCCAAGATTATGATATTAGTAAAAGGCTAGAGCATGCATACAAGTCACTGCAACTGGATCCCGCATCCATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACGGAGAATCTTTGTAGAGGACAAATGA 2094 0.4895 MQETLLTPSEQQQHHSNAGNKEAGEEEKNREIVLVPLPPCRRPPRTRRVSPVEKELGNGDVYSGSLCGNVPHGRGKYVWSDGCMYEGEWKGGKPWGKGRLSWPSGATYEGEFVSGQISGQGTFVGSEGETYRGSWVSDRKHGLGEKRYGNGDVYEGWWRCNLQEGEGRYVWKNGSEYVGEWKGGAMTGNGVLVWRNGDRYDGFWENGVPKGNEEEERGVIVKKRVSVDGSKSVDFPRICIWELDGEAGDITCDIVEAPMFHREVGSGSESENGGGFEQFQRSPVCSIDGGDVKKPGLTISKGHKNYDLMLNLQLGIRYSVGKQALVLRELKPGDFDPKEKFWTRFPSEGSKVTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDALREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTADKPQEEIDETTTLKDLDLSFLFCLEQSWFQVLKWQLDRDCEFLEAEGIMDYSFLIGLHFHDDYSGDELKSSRNELCSDFSAKRDMKNDDMQDMRWMPIGRGPSIRLGINMPARAVRVCKTRLDQHTITGSSNSTPSESSGEISDVILYFGIIDILQDYDISKRLEHAYKSLQLDPASISAVDPKLYSKRFRDFIRRIFVEDK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4415 697 SMART PIPK_2 331 694 IPR002498 GO:0016307|GO:0046488
Lja1g4415 697 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 390 692 IPR002498 GO:0016307|GO:0046488
Lja1g4415 697 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 32 697 - -
Lja1g4415 697 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 300 693 IPR002498 GO:0016307|GO:0046488
Lja1g4415 697 CDD PIPKc_AtPIP5K_like 305 692 - -
Lja1g4415 697 Gene3D - 64 120 - -
Lja1g4415 697 Gene3D - 156 226 - -
Lja1g4415 697 SUPERFAMILY SAICAR synthase-like 301 693 - -
Lja1g4415 697 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g4415 697 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 32 697 IPR023610 -
Lja1g4415 697 PIRSF PIP5K_plant 2 216 IPR017163 GO:0005524|GO:0016308
Lja1g4415 697 PIRSF PIP5K_plant 212 697 IPR017163 GO:0005524|GO:0016308
Lja1g4415 697 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 291 472 IPR027484 -
Lja1g4415 697 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 128 213 - -
Lja1g4415 697 MobiDBLite consensus disorder prediction 1 31 - -
Lja1g4415 697 SMART morn 106 127 IPR003409 -
Lja1g4415 697 SMART morn 152 173 IPR003409 -
Lja1g4415 697 SMART morn 198 224 IPR003409 -
Lja1g4415 697 SMART morn 175 196 IPR003409 -
Lja1g4415 697 SMART morn 83 104 IPR003409 -
Lja1g4415 697 SMART morn 60 81 IPR003409 -
Lja1g4415 697 SMART morn 129 150 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 108 128 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 177 199 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 131 153 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 68 84 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 154 175 IPR003409 -
Lja1g4415 697 Pfam MORN repeat 85 106 IPR003409 -
Lja1g4415 697 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 58 144 - -
Lja1g4415 697 Gene3D - 473 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4415 Lja-Chr1 57286496 57291510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4415 20 696 Acyl Lipid Metabolism Gene Families AT1G21980 61.801 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4415 K00889 - gmx:100808235 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0542 4 4446649 4450996 Lja1g4415 1 57286496 57291510 PCT