Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0507 ATGGCCTTACAAATGCAGTCACCCACAACAACAACCACCCTTCACAACACCCTCACTGTAAATACTGGGCTGCGACGATCCTTCAACCCTCTTGCTCTCAAGTCACCATTTTTCTCTGGTTCACTCAACCTGTATCTTCATCCTAATCACCAACAACTTCTAACTTCAGTAGCACCCAGGATTTCCATGCGTGTGGCTTCCAAGCAATCCTATATCTGTCGTGATTGCGGATATATTTACAGTGATAGAATTCCCTTTGAGAAGTTGCCTGATAACTACTTCTGCCGTGTTTGTGGTGCTCCAAAACGAAGATTTAAGCCCTATGCACCACCTGTGACCAAAAATGCAAATGATATAGATGTTAGAAAGGCACGAAAAGCAGAACTTCAGAGAGATCAAGCAATTGGGAGGGCACTTCCTATTGCAGTTGCTGTGGGAATTGCAGCGCTTGCTGGCTTGTATTTCTATCTGAACAGCGTATACTAG 486 0.4444 MALQMQSPTTTTTLHNTLTVNTGLRRSFNPLALKSPFFSGSLNLYLHPNHQQLLTSVAPRISMRVASKQSYICRDCGYIYSDRIPFEKLPDNYFCRVCGAPKRRFKPYAPPVTKNANDIDVRKARKAELQRDQAIGRALPIAVAVGIAALAGLYFYLNSVY* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0507 161 Gene3D - 69 108 - -
Lja4g0507 161 SUPERFAMILY Rubredoxin-like 68 112 - -
Lja4g0507 161 ProSiteProfiles Rubredoxin-like domain profile. 68 108 IPR024934 GO:0005506
Lja4g0507 161 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0507 Lja-Chr4 4133586 4135555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0507 - - gmx:100812204 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0507 4 4133586 4135555 Lja4g0507 4 4133586 4135555 ECH
Lja4g0507 4 4133586 4135555 Lja1g4379 1 56679152 56680601 PCT