Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0505 ATGGGTGTCAGAAATTTGGGATTTTTAGGGCTTCTCTGTGCTGCTTTTGTCTTTTCAATTGGTGCTGTTGAATTGGGCAGGAATCAGCCACCAGAAAGAATTTCAGGTAGCGCTGGTGATGTATTGGAAGATGATCCGGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGACCCCAGATGCCTCAATCATATGTTTGCTGCTGAGATCTTTATGCACCGGTTTCTTTTATCTAGCGCTGTCCGAACCCTTAACCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACCTGTGACTTGACACCAAATGGCCTTCCTTTACCTTTTAAGTCACCGCGAATGATGAGAAGTGCGATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAGGGGGCAGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTTCATTACCAGGAAGAAAAGGCAATTGAAAGAGGGATTCTTCCACTGCTACAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGCTTGAAAGAGGGCTCAATTACTGTTCCCCCTTATGCTCCACCACAGAAAATGCATACCCACCTAATTCCTGATAAGACTCCAAGGTCCATTTTTGTATACTTCCGAGGGCTGTTTTATGATGTGGGAAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTCTGGGAGAACTTTAAGAACAATCCACTGTTCGACATCTCCACTGAGCATCCAACCACATACTACGAGGACATGCAAAGAGCTGTGTTTTGTCTATGCCCACTGGGATGGGCCCCTTGGAGCCCGAGGTTGGTCGAAGCTGTGGTGTTTGGTTGCATTCCTGTTATCATCGCAGATGACATTGTTCTGCCATTTGCTGATGCAATTCCATGGGAAGATATTGGAGTGTTTGTTGATGAGGAGGATGTACCTAAGTTGGATACCATACTCACATCTATCCCACCAGAAATTATATTGAGGAAACAGAGATTGCTTGCTAACCCTTCTATGAAGCAAGCAATGTTGTTCCCTCAACCCGCTCAACCCGGAGATGCTTTCCATCAAGTTCTAAATGGACTTGCTCGTAAGTTGCCACATGACAGAAGTGTTTTCTTGAAGGCGGGTGACAAGATATTGAACTGGACTGCTGGCCCTGTGGGGGACCTTAAACCTTGGTAG 1251 0.4492 MGVRNLGFLGLLCAAFVFSIGAVELGRNQPPERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITVPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEDIGVFVDEEDVPKLDTILTSIPPEIILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSVFLKAGDKILNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0505 416 Pfam Exostosin family 49 344 IPR040911 -
Lja4g0505 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Lja4g0505 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0505 Lja-Chr4 4125040 4128163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0505 K20870 - gmx:100812747 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4377 1 56566869 56571948 Lja4g0505 4 4125040 4128163 ECH
Lja4g0505 4 4125040 4128163 Lja4g0505 4 4125040 4128163 ECH
Lja1g4377 1 56566869 56571948 Lja4g0505 4 4125040 4128163 PCT