Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0472 ATGGCCATGACCCGTGAATCTTGGGCTTTTGTCTTCGGCCTTATGGGCAATGTGATCTCCTTCATGGTGTTTCTTGCTCCACTACCAACTTTTTACCAAATCTACAAGAAGAAAACAGCTGAAGGGTTTCAGGCACTTCCATATGTTGTTGCACTCTTCAGTGCAATGCTTTGGATCTACTACGCCTTTGTCAAGAGGGAATCTGCCCTCCTTCTCATCACCATAAACACTTTTGGAATTGTTGTGGAGAGCATATATATTGCATTCTTCTTGTTTTATGCCCCAAAGAAGTCTAGGCTTTCGACCATAAAACTCCTCCTCTTGCTGAATGTTTTTGGATTCGGAGCCATGCTTCTAGCAACTCTCTACCTCTCAAAGGGAGCAAAGCGTCTTCAAATTATAGGGTGGATTTGCCTTGTGTTCAATATTAGTGTCTTTGCTGCGCCTCTCTTCATCATCAGCAAAGTCATAAGGACGAGGAGCGTGGAGTACATGCCCTTTTTCTTGTCCTTCTCTTTGACCATCAATGCTGTTATGTGGTTCTTCTATGGCATGCTCCTCAGGGATTATTACGTTGCTCTTCCAAACACACTTGGCTTTGTGTTTGGCATAATTCAGATGGTGGTGTATTTGATATACAGAAACGCCACCCCAGTGGTAATAGAGGAGAAGGTGAAGGGTCAAGAAATGAGTGGTGACCATATCATTGATGTTGCGAAGGGTGGTGCCGTTAGCAAAGTCTGA 744 0.4395 MAMTRESWAFVFGLMGNVISFMVFLAPLPTFYQIYKKKTAEGFQALPYVVALFSAMLWIYYAFVKRESALLLITINTFGIVVESIYIAFFLFYAPKKSRLSTIKLLLLLNVFGFGAMLLATLYLSKGAKRLQIIGWICLVFNISVFAAPLFIISKVIRTRSVEYMPFFLSFSLTINAVMWFFYGMLLRDYYVALPNTLGFVFGIIQMVVYLIYRNATPVVIEEKVKGQEMSGDHIIDVAKGGAVSKV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0472 247 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Lja4g0472 247 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Lja4g0472 247 Gene3D - 129 223 - -
Lja4g0472 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 243 - -
Lja4g0472 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 243 - -
Lja4g0472 247 Gene3D - 11 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0472 Lja-Chr4 3859831 3862565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0472 1 240 Miscellaneous Gene Families AT5G50800 57.500 1.64e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0472 K15382 - gmx:100805676 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0472 4 3859831 3862565 Lja4g0472 4 3859831 3862565 ECH
Lja4g0472 4 3859831 3862565 Lja1g4341 1 56065196 56067527 PCT