Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0463 ATGTACCTACATTGCACGCACACACTACTGCACAAATATTTACGGCAAAAGCATTCAGCCACAGCAGCAGCCATAGCAGTAGCAGCTGCAGCATTACCAACCAAGCTTATCTCTCTCTCAGCAAAGCCAATGGGAGAGGAGGAGAAGAAACCAGAGGAGAAAAAACCAGAGGAACAACCCAACAAGGGAGAAGAGAAGAAGGAGGAAAAACCGGCGGAGGAGAAGAAACCGGAGGAACCAAGCAAGGATCAAGCTCCACCGCCAGAAATTGTGCTGAGAGTGTTCATGCATTGCGAGGGTTGTGCCCGGAAGGTTCGCCGCTCTCTCAAGGGATTCCCAGGGGTTGAAGATGTGATCACTGATTGCAAGTCTCACAAGGTGGTTGTGAAAGGAGAGAAAGCGGATCCGGTGAAGGTTCTGGAGAGAGTGCAGAGGAAGAGCCACAGACAGGTTGAGCTTCTCTCTCCGATCCCAAAGCCACCGGCAGAGGAGGAGAAAAAGCCAGAGGAGCCTGAAAAGCCTAAGCCAGAGGAGAAGAAAGAAGAGCCTCAGATCACAATAGCAGTTCTGAAAGTTCACATGCATTGTGAAGCTTGTTCACAGGAAATCAAGAGACGCATAGAGAGAATCAAAGGAGTGGAATCAGCTGAGCCAGATCTTAAGAACTCACTGGTGAGTGTGAAGGGAGTGTTTGAGACAGAGAAGCTAGTGGAGTATGTGTACAAGAGGACTGGGAAGCAGGCAGTGATAGTGAAGAGTGAGCCAGAGAAGAAGGAGGAAGCAAAAGAGGCCAAAGAGGAGAAGAAAGGTGATGAGGAAAAGAAGGGTGATGATGCTGCTGGTGGTGGGGGTGCAGAAGAGAACAAAGAGAAGAAAGAAGGGGAAGGAGAGGCCAAAACAGGAGAAGGGGAAACTACTACAGAAGAAACAAAAGTGGTGGAGATGAAGAAGAGTGAGTACTATTTCAACCCACCAAGGTATGGAATGGAGTTCTATGCAGGAGGAGGAGGATATCCTGGGCCAGCATACCCACCCCCACCCCAGATCTTCAGTGATGAGAACCCCAATGCCTGCTCTGTCATGTAA 1086 0.4945 MYLHCTHTLLHKYLRQKHSATAAAIAVAAAALPTKLISLSAKPMGEEEKKPEEKKPEEQPNKGEEKKEEKPAEEKKPEEPSKDQAPPPEIVLRVFMHCEGCARKVRRSLKGFPGVEDVITDCKSHKVVVKGEKADPVKVLERVQRKSHRQVELLSPIPKPPAEEEKKPEEPEKPKPEEKKEEPQITIAVLKVHMHCEACSQEIKRRIERIKGVESAEPDLKNSLVSVKGVFETEKLVEYVYKRTGKQAVIVKSEPEKKEEAKEAKEEKKGDEEKKGDDAAGGGGAEENKEKKEGEGEAKTGEGETTTEETKVVEMKKSEYYFNPPRYGMEFYAGGGGYPGPAYPPPPQIFSDENPNACSVM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0463 361 Coils Coil 254 274 - -
Lja4g0463 361 ProSiteProfiles Heavy-metal-associated domain profile. 194 250 IPR006121 GO:0046872
Lja4g0463 361 MobiDBLite consensus disorder prediction 159 184 - -
Lja4g0463 361 Gene3D - 184 251 - -
Lja4g0463 361 MobiDBLite consensus disorder prediction 253 316 - -
Lja4g0463 361 CDD HMA 189 248 IPR006121 GO:0046872
Lja4g0463 361 MobiDBLite consensus disorder prediction 41 88 - -
Lja4g0463 361 MobiDBLite consensus disorder prediction 140 184 - -
Lja4g0463 361 ProSiteProfiles Heavy-metal-associated domain profile. 96 152 IPR006121 GO:0046872
Lja4g0463 361 Gene3D - 87 159 - -
Lja4g0463 361 Pfam Heavy-metal-associated domain 190 245 IPR006121 GO:0046872
Lja4g0463 361 Pfam Heavy-metal-associated domain 91 145 IPR006121 GO:0046872
Lja4g0463 361 SUPERFAMILY HMA, heavy metal-associated domain 92 146 IPR036163 GO:0046872
Lja4g0463 361 CDD HMA 96 152 IPR006121 GO:0046872
Lja4g0463 361 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 44 361 IPR044577 GO:0046872
Lja4g0463 361 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 44 361 - -
Lja4g0463 361 MobiDBLite consensus disorder prediction 42 83 - -
Lja4g0463 361 SUPERFAMILY HMA, heavy metal-associated domain 185 250 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0463 Lja-Chr4 3760582 3762481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0463 - - gmx:100796289 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4327 1 55830201 55832524 Lja4g0463 4 3760582 3762481 ECH
Lja4g0463 4 3760582 3762481 Lja4g0463 4 3760582 3762481 ECH
Lja4g0463 4 3760582 3762481 Lja1g4327 1 55830201 55832524 PCT