Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0448 ATGGCACTACAACAACAGCTAGACAAATTCAAGAAACAGCAGGAGAAGTGTCAGTCAACACTGTCGAACATTGCAGCCAACAAGGCTGCAAACCGAAAATCTTCTGCTCCAGTAGTAGCTGCACCGGCATCAGCCAATGGAATAAATCCAGCACCTGCTGTCAAATTCTCAAATGACACCGTGAGGCTTCAGAATATTCACACCATACGCAATAGCACTGTGGGTCATCAGATGAAGCGTGTCATTGAGCTCCTGCTAGAGACACGGCAAGCCTTTACACCAGAGCAAATTAAGGAAGTATGCTATGTTGACATGAAGGCTAACAAAGATGTTTTTGACAGTCTGAGGAAAAACCCGAAAGTACACTATGATGGGCAACGATTCTCTTACAAGTCAAAGTATGGCCTTAAGGACAAAACAGAGCTTCTTCAACTGATACGAAAGTTTCCTGAGGGCATTGCGACTATTGACTTAAAGGATGCTTACCCCAATGTGAAGGAAGACTTACAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCAAATTTTGATTCACACGACGAAGACATTGCCTACCCTAATGACCCCAAAGTGCATATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGAGCATTGAATTGCCTCAAGACATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCAACCAACACCGCAAAGAGGAGGAGTGCAGCAGAAATTCAAGGCATTCCTTCCAAGTCCAAGCCTAAGAAGAAGAAGAGGGAAATTAGCAAGAGAACCAAGCTGACCAACACCCATCTTCCGGAGCTCTTTCAGAACTTATTCAATTCCTGA 855 0.4409 MALQQQLDKFKKQQEKCQSTLSNIAANKAANRKSSAPVVAAPASANGINPAPAVKFSNDTVRLQNIHTIRNSTVGHQMKRVIELLLETRQAFTPEQIKEVCYVDMKANKDVFDSLRKNPKVHYDGQRFSYKSKYGLKDKTELLQLIRKFPEGIATIDLKDAYPNVKEDLQALKAAGQIWLLSNFDSHDEDIAYPNDPKVHIKVDDDLKQLFRSIELPQDMIDIEKDLQKNGMKPATNTAKRRSAAEIQGIPSKSKPKKKKREISKRTKLTNTHLPELFQNLFNS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0448 284 PANTHER BNAA02G21830D PROTEIN 1 281 - -
Lja4g0448 284 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 281 IPR016656 GO:0005673|GO:0006367
Lja4g0448 284 MobiDBLite consensus disorder prediction 233 271 - -
Lja4g0448 284 Pfam TFA2 Winged helix domain 2 137 195 IPR040501 -
Lja4g0448 284 PIRSF TFIIE-beta 1 281 IPR016656 GO:0005673|GO:0006367
Lja4g0448 284 Pfam TFIIE beta subunit core domain 77 134 IPR003166 GO:0006367
Lja4g0448 284 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 62 137 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0448 Lja-Chr4 3655329 3659448 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0448 K03137 - gmx:100802433 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0003 2 45413 47539 Lja4g0448 4 3655329 3659448 PCT