Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0440 ATGTTCAGATGGAGGAATGACAAGAACAGAGTCAAAGCTGTTTTCAAGCTCCATTTCCATGTCACTCAGGTGCTGCAACCTGGGGTGGATAGTTTGGTGCTTTCTATTGTTCCAGGTGATATTGGAAAGGTAACTACCAGATTAGAGAAAGCTTTGGTTCGTGGAGGAGTTTGTAGATGGGAGAATCCTGTGTATGAAACAGTCAAGTTCATTCAGGATCCTAAGACTGGGAAATTCAGTGAGAGAGTGTATTATTTTGTGGTTTCAACGGGGTTATCAAAAGGTAGCTCATTTGGGGAAGTTTCTGTGGATTTTGCTAGTTATGCAGATGCTACTAAGCTCTCCTCTGTCTCTCTTCCCATCAAGAATTCTCATTCTGATGCTGTCTTGCATGTTTCCATCCAGAGACTACAAGATAATAATGACACAAGAGAGGAAGAGGAATGTGAAGATGCTAAACTGAAACCCCATGATAGGAGCTTGAGGACCTATTTAAGCAATGGAGATATAGATGGACTCTCTAAGAGTGATTCTTCTGAAGACGTGTCTGCCAAAGAAAGCACCAATAGAGTTGAATTAAGTGCTGATCGTAGGACATCTAGTGGATCATCTGAAATTACATTGTCAAGTTCTGATGGAAGCTTTGGACTTGATACTCCCCGAGAACTTGCACTACAAAATACTAGCATCCTCCCCAATGCAAATGGTTTTCTTTCAGACATGAGCCACGCTTCCGAGCCTCAAAAACTTGCTGTTAATGCCTCTCCATCATTGTATGATGTACATCAGAGATCACACTGGGACTGGTCAGCTGGTTCAGAACATGGTTTGAGTGCGGATGATGCAATTCATGGTTCTCAGGATGCCCTTTCGGGAGAAAGATCCCATCAGCCATCCGACATGGAGAATGAGAAACTCAAGGCTCAAGTTGCTGCTTTGGCTAGGCAGATGGAAGTGTCAGACTTGGAACTTCAAACTCTTAGGAAACAAATTGTAAAGGAAAGTAAAAGAGGTCAAGAGCTCTCAAAGGAAGCCATCAGCTTGAAAGAGGAACGGGACAAACTCAAGGTAGAATGCGGAAATTTAAGGTCTTTCCACAAACGAATGGATGAGGCAAAAGCTGGCAACACATCACAATTGGAAAGTGTGGATCTCCGCACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTATGAGAAGGACCTGAACACAAATCTCCGGCTACAGTTAGAGAAGACGCAGGATTCAAATGCTGAATTAGTTCTCGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGGGAAATATGTGGTCTTTCCAATAAAAATGAACAGAGTAAAAGCTCACATGATTTAGAGAGAAATCTCTCTAATTGTGAAGCAGACGATGATGAAGAACAGAAAGAACTGGAAGAGCTTGTTAAGGAGCACAGCAATGCCAAGGAGACGCACTTACTTGAGCAAAAAATCTTAGATCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTGGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAGATATTGAAACAGGAAAACCATGACATGGCATATAAGCTGGAGCAGAGCGAACTGCAAGAACAGTTAAATTTGCAGTATGAATGCTCTTCTCCTCATGCTGTAGATGACATGGAAACCCATATCCAGAGTCTGGAAAATCAACTCAAGAAACAATCAGATGAATTCTCTAATTCTCTGGCTACCATTAAGGACCTTGAATCCCAAATCAGCAGATTAGTGGAACTGGAGAAACAATCAGAAACCCATGTCCAGAGTCTCGAAAATCAACTCAAGAAACAATCAGAAGAATTCTCTAATTCTCTGGCTACCATTAAGGACCTTGAATCCCAAATCAGCAGATTAGAGGAATTGGAGAAACAATCAGAAACCCATATCCAGAGTCTGGAAAATCAACTCAAGAAACAATCCGAAGAATTCTCTAATTCTCTGGCTTCCATTAAGGTCCTTGAATCCCAAATCAGCATATTACAGGAGGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGATATAGATGATGTGATGCGTGAGAAAGTTGAGCAGGAACAAAGAGCCATCCGAGCCGAGGAAGCTTTGCAAAAGACCAGATGTAAAAATGCTAATACTGCTGAGAGGCTCCAAGAAGAATTCAAAAGGCTTTCAATGCAAATGGCATCTACGTTTGACGCAAACGAGAAGGCTACCATGAAGGCATTCACAGAAGCAAGTGAACTTCGTGGACATAAAAGACTACTTGAAGGAATGCTGCATAAAGTCAAAGAAGAGCTTCAATCAGTCAAGGTTGATTATGAGGTTAAACTGAATGAACTTTCCAACAAAATAGATATGATGACAGTTCAAATACAAGAGATGATGTTGGAAATTGAGGACAAGTCCAAACAACTTGAAAATCAGAAAACTCACGAAGAACAACTTAGCGGGGATTTCTCTGAGAAGATCCAGATGCTAAAAGCTGAAAATGGGAAGCTTAAAGCGGAGATTTCGTGCTTATCTGCGCAAGTAAAGCAAAAAGAAATCTTAAGAACTGACTTGGAACTTACGAAAAAATCACTTGAGGACTCTGAGACCCTGTTACATAGTAAAATGGTGGAAAGAAATGAGCTGGTGACCACAATCGCTCTATTGAAGAAGGAGGTAGAAAAGTCACTTGACGAGTTAAATAGGATGATACACCTCAAGAATGAAGAAGAGAAGGTTGCTGGAGTCTTGCATTCAGAGATAGAAGCGCTTAAAGCTCAATGTAGTGACATGAAACAATCCCTTATCGAGGATGAGACTGAGAAAGAAAAACTAAGAACGCAAGTTTTGGAGCTAAGTGGTGAGCTAAAGAAAAAGGATGATGCATTAACCAACATGGAGAAGAGATACAAGGATAGTAATGGATGCACACAGCTTTCTCATGGTACTAAATCAATTCCTGAGAATTCAAAAGAAATGTCAAATCTCAAGGAGAAAATACAAATGCTGGAGGACCTGATAAAATCAAAGGAAACTGCAATGGAAACGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAACTGAAATCCAAAATTGAGGAACTGGAGGACAAAGTAGAGGAATTCAATCAGAGCATTGCTTTGCTAGAGGTTGTTGAGGATAAGAGTGTGCCTGCTTCCAATGATACATCTGGAGAAGTAAGAAGTACAGCTGATGAGCATCTCGATGATACTACACGTGTTGCAGTTTCATCATTCAAGAGTGATATATATTTGTTAGAGAATGAAGCCGAAACATCCTCAATGAATCACAACTCTTGTGACATGCCAACTGAATTATCATCATTAAAGGAAAGAAATAACTCAATGGAGACTGAGCTGAAAGAGTTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCGGAGGTCGAAGGTGAAAGGCAAAAACTTGTTATGACTGTGCGAAGCCTCAAGAATGCTCGGAGGAGTAAAAATGAATAA 3525 0.4068 MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSSEDVSAKESTNRVELSADRRTSSGSSEITLSSSDGSFGLDTPRELALQNTSILPNANGFLSDMSHASEPQKLAVNASPSLYDVHQRSHWDWSAGSEHGLSADDAIHGSQDALSGERSHQPSDMENEKLKAQVAALARQMEVSDLELQTLRKQIVKESKRGQELSKEAISLKEERDKLKVECGNLRSFHKRMDEAKAGNTSQLESVDLRTLVEEIKQELKYEKDLNTNLRLQLEKTQDSNAELVLAVQDLDEMLEQKNREICGLSNKNEQSKSSHDLERNLSNCEADDDEEQKELEELVKEHSNAKETHLLEQKILDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDMAYKLEQSELQEQLNLQYECSSPHAVDDMETHIQSLENQLKKQSDEFSNSLATIKDLESQISRLVELEKQSETHVQSLENQLKKQSEEFSNSLATIKDLESQISRLEELEKQSETHIQSLENQLKKQSEEFSNSLASIKVLESQISILQEELEKQAQGFEADIDDVMREKVEQEQRAIRAEEALQKTRCKNANTAERLQEEFKRLSMQMASTFDANEKATMKAFTEASELRGHKRLLEGMLHKVKEELQSVKVDYEVKLNELSNKIDMMTVQIQEMMLEIEDKSKQLENQKTHEEQLSGDFSEKIQMLKAENGKLKAEISCLSAQVKQKEILRTDLELTKKSLEDSETLLHSKMVERNELVTTIALLKKEVEKSLDELNRMIHLKNEEEKVAGVLHSEIEALKAQCSDMKQSLIEDETEKEKLRTQVLELSGELKKKDDALTNMEKRYKDSNGCTQLSHGTKSIPENSKEMSNLKEKIQMLEDLIKSKETAMETSASSFLEKERELKSKIEELEDKVEEFNQSIALLEVVEDKSVPASNDTSGEVRSTADEHLDDTTRVAVSSFKSDIYLLENEAETSSMNHNSCDMPTELSSLKERNNSMETELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNARRSKNE* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0440 1174 Coils Coil 555 582 - -
Lja4g0440 1174 Coils Coil 1025 1059 - -
Lja4g0440 1174 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 141 IPR019448 -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 601 643 - -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 643 1171 - -
Lja4g0440 1174 Coils Coil 993 1020 - -
Lja4g0440 1174 Coils Coil 597 719 - -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 600 - -
Lja4g0440 1174 Coils Coil 834 854 - -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 601 643 - -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 643 1171 - -
Lja4g0440 1174 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Lja4g0440 1174 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 600 - -
Lja4g0440 1174 MobiDBLite consensus disorder prediction 194 215 - -
Lja4g0440 1174 Coils Coil 1120 1154 - -
Lja4g0440 1174 Coils Coil 303 358 - -
Lja4g0440 1174 Coils Coil 492 526 - -
Lja4g0440 1174 Coils Coil 928 948 - -
Lja4g0440 1174 Coils Coil 417 437 - -
Lja4g0440 1174 Coils Coil 451 485 - -
Lja4g0440 1174 Coils Coil 774 826 - -
Lja4g0440 1174 MobiDBLite consensus disorder prediction 174 193 - -
Lja4g0440 1174 Coils Coil 897 917 - -
Lja4g0440 1174 MobiDBLite consensus disorder prediction 160 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0440 Lja-Chr4 3586573 3592556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0440 - - lja:Lj4g3v2951010.2 1625.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0440 4 3586573 3592556 Lja4g0440 4 3586573 3592556 ECH
Lja2g0001 2 21547 27350 Lja4g0440 4 3586573 3592556 PCT