Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0001 ATGTTTCGTTCTGCAAGATGGAGGAGTGACAAGAACAGAGTCAATGTTGTTTTCAAGCTGCATTTTCATGCCACCAAGGTGTTACAATCTGGGGTGGATGCATTGGTGCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACAAGGAGATTAGAGAAAGCTACCGTTCGAGATGGACATTGTAGATGGGAGAATCCGGTACACGAAACAGTCAGATTTATTCAGGACCCTAAAACTGGGAAAATCAGTGACAAGATTTATAAGTTTTTGGTCTCAACGGGGTTATCAAAAAATAGCTGCATTGGGGAGGTTTCTGTTAACTTTGCTGATTATGTCGATGCTACAAAGCCCCTAAGTCTCTCTCTTCCCATCAGGAATTCTCATTGTGATGCTGCTGTTTTGCATGTATTGATCCAGAGGCTCCAAGATAATAGTGATCAGAGAGAGGAAGATGAATGTGAAGATGCCAAACTAAAATCTGATGATAGGAGCTTAAGAAACCGATTAAGCAATGGCCATATAGATGAAAGCATTAAAAGTTATTCTTCTGAAGATGTCTCTGCAAAAGCAAACATCAATAGGACATCTAGTGGATCTGATACTACATTGTCAAGTTCTGATGACAGTTCTGGGCTTGATAGTCCCCACGAAATCGGTATAGGAAAAACAAACATCCACTCTACAACAAATCAGTTTGTTCGCCAAACATCAGAACCTCAAAACCAAGCTGTCAATGCCTCAACATCAATGCATGATGATGTACATCAGAGATCACACTGGGGCTGGTCAGCTGAGTCAGATCATGGTTTAAGTACAGGGGATTCAACCAATGTTTCTCCTGATTCACTCCCAAAGAAAATGTCCCAACAGGAACCTCCTTCAGAAATTGAGAGAGTCAAGGCTGAATTTGCTGCTTTGGCAAGGCATGTGGATGTGTCAGACCTGGAACTACAGACCCTCAGGAAGCAGATTGTAAAGGAGAGCAAAAGAGGGCAGGAGCTCGCAAAGGAAGTCATTATCTTGAAAGAGGAAAGGGATGCACTCAGGATAGAATGTGACAATCTCAGGTCTTTCCACAAGCGCAAGGGCGAGGCGGCCACAGTGAGAAGCAGGTCACAATTGGAAAGCGGAGATCTTCGAACTTATGTTGATGAAATTAGACAAGAATTGAATTATGAGAAGGATCTGAACGCAAACCTGCGCTTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTAGTTCTTGCTGTGCAGGACCTTGATGAAATGTTGGAGCAGAAAAATCAGGAAAACAATGCAGTTTTAGGGGCCAACCTCTCTAAATGTGAACTAGATGACGATCCAGAACAGAAAACATTTGACGAGCTTGTTAAGGAGCGCACTGATGCCAAGGAAACACACTTACTTGAAAGGAAAATCATAGATCTCTATGGTGAAATAGAAATGTATCGCAGAGACAAAGAGGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAGATATTGAAACAGGAAAATCATGGCATTGCGCATAAGCTGGAGCAGAGCCAAATGCAGGAACAGTTGAAAATGCATTATGAATGTTCATCTCCTGTTGACATGAATGGCATCGAAACGCACATTGCGAATCTGGAAAATCAACTCAAGGAACAGTCAGAAGAGTTCTCAAATTCTCTCGCTACCATTAAGGAGCTTCAAACTCATATCAGAAGATTAGAGGAAGATCTGGAGAAACAAGCAAAAGGGTTTGCAGCTGATATTGAAGCTGTCACACGTGACAAGGTTGAGCAAGAGCAAAGAGCCATCCAAGCCGAGGAAGCTTTGCGAAAGACCAGACTAAAAAATGCTGCTACTGCTGAGAGGCTTCAAGAGGAGTTTCAAAGGCTCTCAATGCAACTAACCTCTACATTTGATGAAAATGAGAAGGCTGCCATGAGAGCAATGAAAGAAGCAAGTGAACTGCGTGCGCAGAAAAGTGTACTGGAAGAAATGCTGAATAAAGTTAGAGAAGAGCACCAGTCAACTAAAGCTGATTATGAGGTAAAACTGAATGAGCTTTCCAACCAAATAGATTCAATGACAGTTCAGATACAACAGATGTTATTAGAAATTGAGGACAAGTCCAAGCAGCTTGAAAATCAGAAGGAACATGGAGAACAAGCTAGTAGGGATTTGTCTGAGGAGATAGGGATGCTAACTGCAGAAAATGAAAAGCTTAGAGTGGAGATTTCACGCTTATGTGAAGAAGTTGAAGGAAAAGAAAATTTCAGAACTGACTTGGAACTTCTGAAGAAAACAATTGAGGAATCTGAGGAACTGTTACAAAGAGGAACTGTGGAAAGAAATGAACTCTTGAGTACAATTGCATTATTGAAGAAGGAAGCAGAGGATTCACTTAGTGAGCTAAATCGGATGAAGCATCTTAAGGATGAAAAAGATGTTGAGGCTGGACTCTTGCAGTCAGAGTTGGAATCCCTTAAAGCTCAATACAGTGATTTGAAACACACTCTTTTTGAGGATGAGGCTGAGAAAGAAAAACTCAGAAAGCAAGTTTTCCAGCTAAAGGGTGAACTAAAGAAGAAGGACGATGCATTAATCAGCATTGAGAAGAGGTTCAGGGATAGTAATGGGCGCACACAAGTTAGTGATGGAACTAAAACCATTCCAAAGAACAAAAAGCCTGCTTTAAGTCCTCCTCAACATTCAAAAGAAATGGCAAGTCTGAGGGAGAAAATAAAAACGCTTGAGGGCAAGATACAGTCAAAAGACAGTGCTTTGGAAACTTCAACAACTTCATTTCTGGAGAAGGAAAAGGAATTCCAGACAAAAATTATGGAGCTGGAGAGCAAAGTGGAGGAATTAAATCAGAGTATTTCTTTGCAGAAGGTTGCTCAGGATAGAATTACTGTTACAAATGAGATATCTAGAGAAATAAGTAATGGTGAGCATCTCGAAGATGGTGCATGTGGATCTGAAGAAAGAGGAGCTGCATTGTTACTCAATAGTAATGTGAACTTGCCAGAGCAGGAAGCTGGAACCTCCATAATGGATACTGAAGACAGCAATCTTACTGACATATTAACCGAGTTATCGTCACTGAAGGAAAGAAACAACTCAATGGAAAGCGAACTTAAAGAGATGCAGGAGAGATACTCAGAAATAAGCCTCAAATTTGCTGAGGTAGAAGGTGAAAGACAAATGCTTGTTATGACTGTACGAAACCTCAAGAGTGTCCAGAAGTGCTAA 3255 0.4123 MFRSARWRSDKNRVNVVFKLHFHATKVLQSGVDALVLSIVPGDIGKPTRRLEKATVRDGHCRWENPVHETVRFIQDPKTGKISDKIYKFLVSTGLSKNSCIGEVSVNFADYVDATKPLSLSLPIRNSHCDAAVLHVLIQRLQDNSDQREEDECEDAKLKSDDRSLRNRLSNGHIDESIKSYSSEDVSAKANINRTSSGSDTTLSSSDDSSGLDSPHEIGIGKTNIHSTTNQFVRQTSEPQNQAVNASTSMHDDVHQRSHWGWSAESDHGLSTGDSTNVSPDSLPKKMSQQEPPSEIERVKAEFAALARHVDVSDLELQTLRKQIVKESKRGQELAKEVIILKEERDALRIECDNLRSFHKRKGEAATVRSRSQLESGDLRTYVDEIRQELNYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNQENNAVLGANLSKCELDDDPEQKTFDELVKERTDAKETHLLERKIIDLYGEIEMYRRDKEELEMQMEQLALDYEILKQENHGIAHKLEQSQMQEQLKMHYECSSPVDMNGIETHIANLENQLKEQSEEFSNSLATIKELQTHIRRLEEDLEKQAKGFAADIEAVTRDKVEQEQRAIQAEEALRKTRLKNAATAERLQEEFQRLSMQLTSTFDENEKAAMRAMKEASELRAQKSVLEEMLNKVREEHQSTKADYEVKLNELSNQIDSMTVQIQQMLLEIEDKSKQLENQKEHGEQASRDLSEEIGMLTAENEKLRVEISRLCEEVEGKENFRTDLELLKKTIEESEELLQRGTVERNELLSTIALLKKEAEDSLSELNRMKHLKDEKDVEAGLLQSELESLKAQYSDLKHTLFEDEAEKEKLRKQVFQLKGELKKKDDALISIEKRFRDSNGRTQVSDGTKTIPKNKKPALSPPQHSKEMASLREKIKTLEGKIQSKDSALETSTTSFLEKEKEFQTKIMELESKVEELNQSISLQKVAQDRITVTNEISREISNGEHLEDGACGSEERGAALLLNSNVNLPEQEAGTSIMDTEDSNLTDILTELSSLKERNNSMESELKEMQERYSEISLKFAEVEGERQMLVMTVRNLKSVQKC* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0001 1084 Coils Coil 474 508 - -
Lja2g0001 1084 Coils Coil 537 585 - -
Lja2g0001 1084 Coils Coil 397 431 - -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 192 222 - -
Lja2g0001 1084 Coils Coil 622 752 - -
Lja2g0001 1084 Coils Coil 756 783 - -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 192 212 - -
Lja2g0001 1084 ProSiteProfiles C2 NT-type domain profile. 6 142 IPR019448 -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 234 294 - -
Lja2g0001 1084 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1083 - -
Lja2g0001 1084 Coils Coil 812 867 - -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 878 906 - -
Lja2g0001 1084 Coils Coil 908 928 - -
Lja2g0001 1084 Coils Coil 317 337 - -
Lja2g0001 1084 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 268 289 - -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 144 164 - -
Lja2g0001 1084 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1083 - -
Lja2g0001 1084 MobiDBLite consensus disorder prediction 234 251 - -
Lja2g0001 1084 Coils Coil 1026 1067 - -
Lja2g0001 1084 Coils Coil 590 617 - -
Lja2g0001 1084 Coils Coil 940 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0001 Lja-Chr2 21547 27350 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0001 - - gmx:100792602 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0001 2 21547 27350 Lja4g0440 4 3586573 3592556 PCT