Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0398 ATGGCAGCGACAACCACAACAACATTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACAACGTAAGTGTCGTCAAACCACTATCTCCTCCTCCGCTTCCTCTTCTACTTCTTCCTCTCCAAACGACACCGTTTCCACCCGCACTCGCGATGCCACCATAACAACCCACGAACCCGAACCCAACCCGCAATTACCCGATTCACCTTCAACCTACTACAGATTCCGATTCTCCCCTGGCAAGTCTTCCCCAGTCATGGACTACACTCACTCTTCTCCGCTTTCCAACGGACATTCGGGTCCGGGTCAGGGTCATGACCCGTTTCCTTCCAGCTTCTCCAAGTTCAACAACGCCCTCACCGCTGGCCTCCTCAACCCAATGTCGCCGCCGCCGGATAAACCCCGCTCCAGCCCCACCCTCTTTGAAATGATGGTTAGCGAACCGGATATCAATCATCACAGAAACCAGATCCCGCCGAGTAACAACAACATTGCCGCACCGCCGATGCAGAAACCGCAAATTCCGGTGATGGACCGGCAAACCCTGATGATGCAGCGGATATCGGAGTTGTTAGGTTCTCGGAGCCCCGGGAATCAGTTCAACGACCCGACTAACAGTGACATCAAGCTCACGCTCAGCTCCAAAGATGGGTTTAGCATCTCCATGAACGTGCATCGCCAGATTCTTGTTGCGCATAGCAGATTCTTCTCGGTGAAGCTCTCTGATCGCTGGACGCAGCAGCAGAACCGGTCGGCGTTGCCTTATCTTGTTGAGATTGCTGATTGTGATGATGTTGAGGTTTATGTTGAGACTTTGAGGTTGATGTACTGTAAGGATCTCAGGAAGAAGCTCATGAAGGATGATGTTTCCAGAGTTCTGGGTATCTTAAAGGTTTCAGCAGCAATTGGATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCCCCATGGGCTGAGGATGAAGAAGAAAAGGTGGCCTCGCTCCTGTCGGAGCTTCGTCTTGATTCTGTTGGAGCTGGAGAAGTTTTGAAAAGGGTTTCAATTGAAGTTACCCATGGAAATGAAGAGGGGAGTGATAATGAGGAAGTTCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGCAAAGATGAGAAGGCTAGACGTGAAATGAAAGGGTTGGTGTCAAAGATGCTCCGTGAAAATTCTTCACAGAACGATCTTCGGAAGGAGTCTATATACTCGGCATGCGATGATTGTCTTCAGTTACTTCGTCTCCACTTCTTACAGGCTGCAGCTTCGGACATGCGGGATGTAAGTCAAATTGCAAGGCAAGCAGATAATTTGCATTGGATCTTGGATATTTTAATCGATAGACAGATTGCTGAAGATTTCTTGAAAACATGGGCTTCTCAATCAGAATTATCGGAAGCGCATGCTAAAGTTCCTGCAGTTCATAGGTTTGAGATTAGCAGAGTTACAGCGAGGTTGTTTGTTGGGATTGGGAAAGGACAGTTATTGGCTTCTAAAGATGCTAGGTGTTTACTTCTAAAAACATGGCTGGTTCCCTTTTATGATGATTTCGGTTGGATGAGGAGGGCATCCAAAGGCCTCGATAGGCACCTAATCGAGGATGGTCTTAGTAACACGATTCTCACCCTGCCACTATCCTGGCAACAGGAAATTTTGCTAGCTTGGTTTAATCGTTTCTTGAACTCCGGCGAAGATTGCCCAAATATTCAAAGAGGGTTTGAGGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCAAGAACAGACAAGACAATTACGAATTACATCTGCATCAATTGAGAACCCTTGA 1836 0.4771 MAATTTTTFLKLQNQPTKPKRQRKCRQTTISSSASSSTSSSPNDTVSTRTRDATITTHEPEPNPQLPDSPSTYYRFRFSPGKSSPVMDYTHSSPLSNGHSGPGQGHDPFPSSFSKFNNALTAGLLNPMSPPPDKPRSSPTLFEMMVSEPDINHHRNQIPPSNNNIAAPPMQKPQIPVMDRQTLMMQRISELLGSRSPGNQFNDPTNSDIKLTLSSKDGFSISMNVHRQILVAHSRFFSVKLSDRWTQQQNRSALPYLVEIADCDDVEVYVETLRLMYCKDLRKKLMKDDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLDSVGAGEVLKRVSIEVTHGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRKESIYSACDDCLQLLRLHFLQAAASDMRDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSEAHAKVPAVHRFEISRVTARLFVGIGKGQLLASKDARCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQEQTRQLRITSASIENP* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0398 611 MobiDBLite consensus disorder prediction 1 115 - -
Lja4g0398 611 ProSiteProfiles BTB domain profile. 207 285 IPR000210 GO:0005515
Lja4g0398 611 MobiDBLite consensus disorder prediction 1 16 - -
Lja4g0398 611 PANTHER OSJNBA0011J08.25 PROTEIN 17 609 - -
Lja4g0398 611 MobiDBLite consensus disorder prediction 85 100 - -
Lja4g0398 611 Gene3D Potassium Channel Kv1.1; Chain A 186 319 IPR011333 -
Lja4g0398 611 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 17 609 IPR038920 -
Lja4g0398 611 MobiDBLite consensus disorder prediction 26 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0398 Lja-Chr4 3188164 3192052 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0398 - - ccaj:109800730 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0398 4 3188164 3192052 Lja4g0398 4 3188164 3192052 ECH
Lja4g0398 4 3188164 3192052 Lja1g4509 1 58697883 58700598 PCT