Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4509 ATGGACCGTCGGCGACGCCGTACCTGGTGTTGCTCCTTCGCCGTGCCACCCTCCAGCCCGGACAACGCTTCCTTCACCAAACCACACCGCCACAAACCCGGCGACGCCCAATCCAAACCCACCTTCTCCGTCCCAACCTCCCCTCAGAGCTTCAAATCCAGCGGCTCCCGCATCGTCGGCCGGATCGACCCTCGCCGGATCTTATCCCCCGGCAGAGTCTCCCCCATCGAAGACGCCGCTGCCGTTCCAGACCCCTCTCCCGCTCGCGATTCCGTCACCCGATCTCGGAGCTTCCGCGCACCCCCCGTCGCACCGCCGACTCCGCCGCCGCCAGTTTCCGTGGAGGGGCTTGACGTGAGGATGAGCTTGAGAGGGAAAAATGGTGGGTGCTTGGTTCTGGAGCTGAACTCGGGGATTCTGTGCGCGAACTCGGAGCTTTTCGCGGGGTTGATTGCGGATTACAAGAAGGGGGTTTCTTCTTCGAGTGGTAGTAGTAAAATGTGTAGGATTGAGGTGCCTGAAGTTGACAATTTGGGAGTTTTCAGAGACACCATTGAGCTCATGTTTGAAGATGATCTTACCCGAAAGCTTCTCAACCTTGGTGTTTATCGATCCATTGATGTTTTGGAGGTGTCTGCAGGCATCATGTTCACCAAGGGTGTCTTGTCCTGTTTAAGATACCTTGAGGCTGTTCCTTGGACTGAGGAAGAAGAAGAAAAGTTGAGGAGCCTATTCACGAGGTTTAAGTTTGATGATGAAACAACAAGGGACATTCTAGGAAGGCTTCACTTGCACAATGCAGTAGATTCCGAGCCAAACATAGCCCGGGAACTTGTTACGTCTATCACCACTTGTGTGGATGCCAATGCAAGAAATGAACTTAAATCCCTAGTCAAGGGTCTTCTTTGCAAAAGCTCGGTATATGAGAAGAACCATCTTGACCTCAGCAAGGAAGATTTGTATTCTGTTTGCCATTCATGTCTGGGTTCACTGATCAGCCTCTTCGAGGAGGCGAATGATGCCATCCATCCCAAAAGGTTGACAAAGAAAGAGATGAAGAAACCGCTGATTGAGCGCGTCTCGAGACAGGTAGATAACATCAACTGGTTGTTGGAAATCATGCTTGATATGCAAATAGCTGAGGACTTTGTGGATATATGGGCAGATCAGCACCAACTTCTTCAAATCCATGATAAAGCATCCCCCATGGTTAGATATGAACTCAGCCGAGTGTCGGCAATTCTGTTTGTTGCCATGGCTACTAGAAAGTTACAATGCCGGTTGGAAGCTAGATCAGGGCTTCTCCAGGCATGGTTTAAACCTATGCTGTTGGACTTCGGTTGGTTGCAGAGATGCAGAAAAGGGCTTGATATAAAAGTGTTGCAAGAGGCAATGGGTCAGACACTTCTTACTCTACCTCTGAAGCAACAACACATGCTGTTCATGGAATGGTTTCGGCACTTCTCAAGCCATGGCACCGAGTGTCCAAATCTAAGCAAGGCTTTCCAAATTTGGTGGCGCAGATCGTTTTTAAGAGGCTCTGAGACGTGTGCCATTGAATCAAGGTAA 1569 0.5035 MDRRRRRTWCCSFAVPPSSPDNASFTKPHRHKPGDAQSKPTFSVPTSPQSFKSSGSRIVGRIDPRRILSPGRVSPIEDAAAVPDPSPARDSVTRSRSFRAPPVAPPTPPPPVSVEGLDVRMSLRGKNGGCLVLELNSGILCANSELFAGLIADYKKGVSSSSGSSKMCRIEVPEVDNLGVFRDTIELMFEDDLTRKLLNLGVYRSIDVLEVSAGIMFTKGVLSCLRYLEAVPWTEEEEEKLRSLFTRFKFDDETTRDILGRLHLHNAVDSEPNIARELVTSITTCVDANARNELKSLVKGLLCKSSVYEKNHLDLSKEDLYSVCHSCLGSLISLFEEANDAIHPKRLTKKEMKKPLIERVSRQVDNINWLLEIMLDMQIAEDFVDIWADQHQLLQIHDKASPMVRYELSRVSAILFVAMATRKLQCRLEARSGLLQAWFKPMLLDFGWLQRCRKGLDIKVLQEAMGQTLLTLPLKQQHMLFMEWFRHFSSHGTECPNLSKAFQIWWRRSFLRGSETCAIESR* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4509 522 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 3 522 IPR038920 -
Lja1g4509 522 MobiDBLite consensus disorder prediction 1 113 - -
Lja1g4509 522 PANTHER OS04G0278000 PROTEIN 3 522 - -
Lja1g4509 522 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4509 Lja-Chr1 58697883 58700598 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4509 - - gmx:100777771 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4509 1 58697883 58700598 Lja1g4509 1 58697883 58700598 ECH
Lja4g0398 4 3188164 3192052 Lja1g4509 1 58697883 58700598 PCT