Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0145 ATGCCATGTCCCAAAGAAGAAGTTCTTCTTAGAGTCTTCAACAATGTCTCAAGCTCTTTCCAGCTTCTCTTCCTACTTCTCTTCTCCACTGCCATTTTCCTTCTCACATTCTTAACCTTCACTGGCAGATTCCCCTTAATCCAAAGAGATCAACAATATGAATATGTGTATTCTGATGACGAAGAAGAAGAAGAAGAAAATCAAGAAGGGTATTCTTGTGTTGATTCTACTGAGAAAGCAGACATCACATGTGGCAGTGAAACCCTTTACAAGGAGCTTCAGCCTCAGAGGAATCATTCTTATTCTCAGGAATTCATAACCCCCCAAGAAAGCTTGTTTGAAGATTCAGAAGAAAACCATTGTTCTGAATCAGTGTCTGTCCATGACTCACCTCAAGTTTTTGACTTTGAAGAAGACTTTCCAGCAAGAGATGCTGACTCTCTTCCAAATTATGTCCAAGTTGAAAGCAGGACAACCTCTCCCATCAACCTGAACCCGTACAAAAATGATTATGTTGGTCTTGGAGTTATTAAAAATAAGAAGGTGCAGGAAGCAAACCTCACAAGGGATGAGAGATTCTTTATTTTACCTTCTACCCAGTTGAAGCTTAAGAAGTTGATTGTTGAAAAGAAGGATGACGAGGACTCTACAAGCTCCTCTGAATGGAGGAGCTCTATGATCAATTGCAGGGATTATGATACTGAGGAGGATGCATTTTCTACCTCTTCTAGAAGAAGTTGCCCCAAGTGGGAATCATATACTTTGTTCCAAAAATATGATGAAGAAAAGGCATTCTTGAACAGAACTAGTTCACAGAAACTTCATGAATCTGATTCTATAAGGTCTCCAAGATCAATGTCAGAGCGCATTGCAAACAAGCTTTCAACTATAAACAAAAAGGTTGCTGATGTTGGTCACAACCCATACCGTGAACTAGAGGCTGCATATGTTGCACAAATTTGCTTAACATGGGAAGCACTTAGTTGGAACTACAAAAACTGTCGTTCCAAACATTCTTCACTCCGTGATCTTGATACCGGTTGTCCTGCCATCATTGCACAACAATTCCAGCAATTTCAGGTTTTGTTACAAAGATACATAGAGAATGAGCCTTATGAGCATGGAAGGAGACCTGAGATTTTTGCTAGAATGAGGCTTTTGGCACCAAACTTGCTCCTGGTGCCAGAATGTCAAGATTCAGAGGATGATGAGAAGGATGGTGATTTTCAATGTAAAATATCCTCAGCTTCATTTCTGATGATAATGGAGGAAGGAATCAGAACATTCATGAATTTTCTGAAGACTGATAAAGAAACACCATGTCATATCCTAGCAGCTTACTTTATGCGAAACCTAAGAGGAACAGTTGATCCAACACTACTCCGGCTAATGAAGAAAGTGAATCAAAAGAAGAGGAAGAAGGTTAAGGATCTTAGCCATGCAGGGAGATCATTGAGGAAGAGAAAGTTGAATGTGGAAGAAAAGATGGAGATTTTGATGGCTCTTATAGACCTAAAAGTGGTGTCAAGGGTGTTAAGAATGAATGAGTTGAGTGAAGAACAGTTGCACTGGTGTGAAAATAAAATGAGCAAAGTGAGGATCACTGAAGGGAGACTTCAAAGAGATTATTCAACTCCACTTTTCTTTCCCTCTCATCAACCCACCAGATGA 1671 0.398 MPCPKEEVLLRVFNNVSSSFQLLFLLLFSTAIFLLTFLTFTGRFPLIQRDQQYEYVYSDDEEEEEENQEGYSCVDSTEKADITCGSETLYKELQPQRNHSYSQEFITPQESLFEDSEENHCSESVSVHDSPQVFDFEEDFPARDADSLPNYVQVESRTTSPINLNPYKNDYVGLGVIKNKKVQEANLTRDERFFILPSTQLKLKKLIVEKKDDEDSTSSSEWRSSMINCRDYDTEEDAFSTSSRRSCPKWESYTLFQKYDEEKAFLNRTSSQKLHESDSIRSPRSMSERIANKLSTINKKVADVGHNPYRELEAAYVAQICLTWEALSWNYKNCRSKHSSLRDLDTGCPAIIAQQFQQFQVLLQRYIENEPYEHGRRPEIFARMRLLAPNLLLVPECQDSEDDEKDGDFQCKISSASFLMIMEEGIRTFMNFLKTDKETPCHILAAYFMRNLRGTVDPTLLRLMKKVNQKKRKKVKDLSHAGRSLRKRKLNVEEKMEILMALIDLKVVSRVLRMNELSEEQLHWCENKMSKVRITEGRLQRDYSTPLFFPSHQPTR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0145 556 Pfam Protein of unknown function (DUF1666) 311 550 IPR012870 -
Lja4g0145 556 PANTHER DNA LIGASE (DUF1666)-RELATED 1 552 - -
Lja4g0145 556 PANTHER DUF1666 FAMILY PROTEIN 1 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0145 Lja-Chr4 1097423 1100956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0145 - - gmx:100776190 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0145 4 1097423 1100956 Lja4g0145 4 1097423 1100956 ECH
Lja4g0145 4 1097423 1100956 Lja2g2095 2 23205127 23209738 PCT