Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2095 ATGCCATGTTCAAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCCTCAAGCACTTTCCAGCTTCTCTTTCTCTTCCTCTTCTCCTCTGCCAATTTGCTTCTCAAGCTCTCAAACTTCATCACCAGCTACTCCATATTCCAAAGAGATCAGCAATATGACTATGTGTCCTCTGAATGTGATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTCATGAAAGCTATTCTTATGCTGGTTCTATTGACAGAGAAGATCATTTAGTAGCTGACATAGTTTGTGGTGGAGAAACTCTTTTGTTTCTGCATAAAAACCACCCTCAGGGGAATAATTCTTCTTCTGAAGAATTCATTACTCCTCGAGATAGTTTGATTGAAGAAGATTCAGAAGAAAACAATTCCACAGAAACTTTATCTATTCATAATTCCCCTCTTGTTTCAGAGTTTGAAAATGAAGTGACAGAAGAAGTTGAAGAAGAAGAAGAATTTCCAGCAGAAGATGCTGATTCTGTTCCAAATTCTGTCCCAATTGAAAGCAGGCCCACTTCTCCCATCACCCTGAACATACACAAAAGTGACATAGTGGACAGTGACAAAAACTGTGACGAAAATCATGTTCATATTGGAATTATAAGAAACAAGAAGGTGCAAGAAGAAAATCTCACAAGAGATGAGAGATTCTTTGTCATTGGTCCTACACAATTAGAGACTAAGAAGCTGATTGTTGATGAAAAAGATGAGGAAGAAATATATGGTGATTCCTGCACTGTTGGGTCCACATCTAAGAGCTCCTCTGATTGGAGGAGCTCCATTAATTGCAGGGACTCTGGAACTGATGACCCTTTTTCTTCTTCATCAAGAAGAAGCTGCCCCAAGTGGGAATCATACACAGTTTTCCAGAAATATGATGAAGAAATGTCATTCCTAGACAGGATTAGTGCACAGAAACTTCATGAAACTGAGTCTTTAAGATCTATCAAAGTAGCTCCAAGATCAATATCAGGGCGAATTGTGCACAAAATTTCAACTATGAACAAGAAACCAGATGATACCCGTCACAACCCGTACCACGAACTAGAGGCCGCATATGTGGCGCAAATTTGCATAACATGGGAGGCTCTTAATTGGAACTACAAAAATTTCCAATCCAAAAGAGCTTCAAGGCAAGATGGTGATGTAGGTTGTCCTGAAACCATTGCACAGCAGTTCCAACAGTTTCAGGTTTTGCTGCAGAGGTATGTGGAGAATGAACCTTATGAGCATGGTAGGAGACCAGAGATCTACGCTAGAATGAGGCATATGGCTCCCAAATTGCTCTTGGTTCCCGAATATCGAGAATCAGATGATGATCACAAGGAGAATTCCTTAAAAATATCGTCAGGTTCATTTCTTGTGATAATGGAAGATGGAATCAGAACATTCATGAATTTCCTCAAGGCTGATAAAGAGAAGCCATGTCAGGTCCTTGCAGCCTACTTTAGGAGAAACCGAAGAGGCTTGATTGATCCAACACTACTCCGGCTTATCAAGAAAGTTAATCAAAAGAAGAAGATCAAAGTTAAAGATCTTCGCCGTTCCCACAAATGCTTGAGGAAGAAAAAGTTGAAGGAGGAAGAAGAGATGGAGATTTTGATGGCACTCATAGACCTAAAAGTGGTGTCCAGGGTTTTGAGAATGAGTGACTTGAGTGAAGAGCAGTTGCACTGGTGTGAAGAGAAGATGAGCAAAGTAAGAGTCATGGATGGGAAACTTCAAAGAGATTCCACTCCACTTTTCTTCCCTGCACATTGA 1788 0.4016 MPCSKEEALVRLFYNASSTFQLLFLFLFSSANLLLKLSNFITSYSIFQRDQQYDYVSSECDEEEEEEEEEIHESYSYAGSIDREDHLVADIVCGGETLLFLHKNHPQGNNSSSEEFITPRDSLIEEDSEENNSTETLSIHNSPLVSEFENEVTEEVEEEEEFPAEDADSVPNSVPIESRPTSPITLNIHKSDIVDSDKNCDENHVHIGIIRNKKVQEENLTRDERFFVIGPTQLETKKLIVDEKDEEEIYGDSCTVGSTSKSSSDWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRIVHKISTMNKKPDDTRHNPYHELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPETIAQQFQQFQVLLQRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKENSLKISSGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLIKKVNQKKKIKVKDLRRSHKCLRKKKLKEEEEMEILMALIDLKVVSRVLRMSDLSEEQLHWCEEKMSKVRVMDGKLQRDSTPLFFPAH* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2095 595 MobiDBLite consensus disorder prediction 150 166 - -
Lja2g2095 595 Pfam Protein of unknown function (DUF1666) 357 593 IPR012870 -
Lja2g2095 595 PANTHER DNA LIGASE (DUF1666)-RELATED 1 595 - -
Lja2g2095 595 MobiDBLite consensus disorder prediction 149 183 - -
Lja2g2095 595 MobiDBLite consensus disorder prediction 124 143 - -
Lja2g2095 595 Coils Coil 519 539 - -
Lja2g2095 595 PANTHER DUF1666 FAMILY PROTEIN 1 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2095 Lja-Chr2 23205127 23209738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2095 - - gsj:114425724 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2095 2 23205127 23209738 Lja2g2095 2 23205127 23209738 ECH
Lja4g0145 4 1097423 1100956 Lja2g2095 2 23205127 23209738 PCT