Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0014 ATGGCTTCCGGTACTGATGAGCGTGAAGTTCAGAAAACCTACTGGATCCAGCATTCAGCTGATTTGTCCGTGGAGGCAATGATGCTCGATTCCAAAGCTGCTGATCTGGACAAGGAAGAGAGACCCGAGGTACTTTCTCTATTACCAGATTATGAAGGAAAATCAGTTGTAGAGCTTGGAGCAGGTATTGGAAGATTTACTGGAGAATTGGCTCTCAAAGCTGGTCACTTGCTTGCTGTCGACTTCATTCAGACTGCAATAAACAAGAATCAAACCATTAATGGACACCACAACAATGTCACCTTTCTGTGTGCTGATGTCACATCTCCAAACTTGCATGTTTCTCAAGGATCAATTGATGTCATTTTCTCTAATTGGTTGCTTATGTACCTTTCAGATATTGAGGTTAACAATTTAGCAGAGAGAATGATCAATTGGTTGAAACATGGGGGATATTTATTCTTCAGAGAATCTTGTTTCCACCAATCTGGAGATTCCAAGAGAAAATACAACCCCACTCACTACAGGGAACCCAGTTTTTACACAAAGCTATTTAAAGAATGTAATATGACGGATGATTCTGGGAATTCTTTTGAACTTTCTCTTGTGGGCTGTAAATGCATCGGAGCTTATGTTAGAAATAAGAAGAATCAAAACCAGATTTGCTGGATATGGCAGAAAGTTAGGTCACAACATGATAGGGGATTCCAGCAGTTCTTAGATAGAGTTGAATATAGTCAGAAGAGTATCTTACGATATGAGCATGTGTATGGCCGAGGCTTTGTAAGCACCGGAGGACTTGAAACGACAAAAGAATTTGTGTCGATGCTAGGACTAAAGCCTGGTCAGAAAGTGCTTGATGTTGGTTGTGGTGTTGGGGGAGGTGATTTTTACATGGCTGAAAATTTTGATGTTGAGGTCATTGGCATTGACCTCTCCATAAATATGATTTCTCTTGCTATTGAACGAGCTATTGGACTGAAATACATGGTTGAATTTGATTGCGCCGATTGCTGTAAAAAAACATATCCTGATAAAACATTTGATGTAATCTACACTCGTGATGCCATGTTACACATCAAAGATAAGCCAACAGTATTCAGATCATTTTACAAGTGGTTGAAGCCTGGAGGTAAACTTCTAATTACTGATTACTGTAAAAGTGCTGGAAGTCCGTCTTTAGAATTTGCTGAGTACATTAAGAAAGGAGGATACTATATCCATGACATGAAAGCCTATGAGCAGATGCTCGAGAATGCTGGTTTTGATGATATCATTGCTGAGAATAGAACTGATCTGTTCGTGAAAACACTAAAGCAGGAGTTAGAGGCCCTTGAGAACAAGAAGGACGATTTTATTTGTGAATTTGGTGAAGAAGACTACAATGAAATTGTGGAAAGATGGAAGGCAAAGCAAATCAGAGGTGAATCTCTGGAGCAGATGTGGGGCCTAAGAGTGATTGATCACACTTACAATCACAGTGGCATGGCTGTTAACATTTTTACTACAAATCCAATTTTACTTCACCATCATGCTGCGCCTGGAGATATCATCAGGCTCACTCAAGTCACTGTAGATCCATTTAAAGACGATTTAAATCTTGTTTTCCACAAACAAATTTCCTCTTTTGCTTTATATAAAGGGAAAGATGCTAATAATTTTCACCCTTATCAATTTTCTTCAAAATTTATACCTGGAGCTGAGGATCAAAGGTTCATAGCCCATCTTAGAAGATGGCTCGTCAGTTTTCAGTTTCGTGAAGATCCAAGTAAATTTCCTATGATACGAGAAATCAAGGATGGATTCTTTGGTTTGGCATGCAAGATACTCCATTGCTGGGAGGTTACAGAAGATAAATGGGGCTTCTATGTTTGGGATAGTACTGATGCCCCACCGAACACCATATCTTCCAAGCTAGAAGATGAAATTAATTCTCCACTTCCTCTAACATTGGCTCCCTTGTCTTTGCCAAGAGAGTTATTATGTACATTTCCTGATGTTGGAACCATCTTGTTGATAATTGCTGATCCAGCACTTGTGAAAAGTCAACTTGATGTCCTAAATAGTGGGAAATGGGTCAAAATTGTTAATCTTCATTTTGAAGTGCATGCAGGACTATGGTGTGGTATTTTTATGCCTCAGACAAGGCTTCGATACACACCAAATGAGGACAGTCTCATCATAAAACGCCAAAGGTGGTTGCTAAATTATTTGAACTATATGGTTTGGATATTTTATGTCGGTGAACTGAAATTTCTACATATCCTTTATATTCATGTTGCACCAGGCTGTATAAAGAGCGGATGTTCTTGCAATCAGGAAGAGTGCCTTTTTCATGCAGCTTGCCTAATTCTCTATCTGTCACAGAGAATACTGACGAAAGTGTGCGGCCTATGA 2397 0.3934 MASGTDEREVQKTYWIQHSADLSVEAMMLDSKAADLDKEERPEVLSLLPDYEGKSVVELGAGIGRFTGELALKAGHLLAVDFIQTAINKNQTINGHHNNVTFLCADVTSPNLHVSQGSIDVIFSNWLLMYLSDIEVNNLAERMINWLKHGGYLFFRESCFHQSGDSKRKYNPTHYREPSFYTKLFKECNMTDDSGNSFELSLVGCKCIGAYVRNKKNQNQICWIWQKVRSQHDRGFQQFLDRVEYSQKSILRYEHVYGRGFVSTGGLETTKEFVSMLGLKPGQKVLDVGCGVGGGDFYMAENFDVEVIGIDLSINMISLAIERAIGLKYMVEFDCADCCKKTYPDKTFDVIYTRDAMLHIKDKPTVFRSFYKWLKPGGKLLITDYCKSAGSPSLEFAEYIKKGGYYIHDMKAYEQMLENAGFDDIIAENRTDLFVKTLKQELEALENKKDDFICEFGEEDYNEIVERWKAKQIRGESLEQMWGLRVIDHTYNHSGMAVNIFTTNPILLHHHAAPGDIIRLTQVTVDPFKDDLNLVFHKQISSFALYKGKDANNFHPYQFSSKFIPGAEDQRFIAHLRRWLVSFQFREDPSKFPMIREIKDGFFGLACKILHCWEVTEDKWGFYVWDSTDAPPNTISSKLEDEINSPLPLTLAPLSLPRELLCTFPDVGTILLIIADPALVKSQLDVLNSGKWVKIVNLHFEVHAGLWCGIFMPQTRLRYTPNEDSLIIKRQRWLLNYLNYMVWIFYVGELKFLHILYIHVAPGCIKSGCSCNQEECLFHAACLILYLSQRILTKVCGL* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0014 798 Coils Coil 435 455 - -
Lja4g0014 798 CDD AdoMet_MTases 56 155 - -
Lja4g0014 798 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 206 IPR029063 -
Lja4g0014 798 SUPERFAMILY Nucleic acid-binding proteins 602 704 IPR012340 -
Lja4g0014 798 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 252 475 IPR029063 -
Lja4g0014 798 CDD AdoMet_MTases 284 385 - -
Lja4g0014 798 Pfam Telomeric single stranded DNA binding POT1/CDC13 484 580 IPR011564 GO:0000723|GO:0000781|GO:0003677
Lja4g0014 798 Pfam Methyltransferase domain 279 425 - -
Lja4g0014 798 Gene3D Vaccinia Virus protein VP39 241 489 IPR029063 -
Lja4g0014 798 PANTHER PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE 6 486 - -
Lja4g0014 798 Pfam Methyltransferase domain 58 155 IPR013216 GO:0008168
Lja4g0014 798 Gene3D Vaccinia Virus protein VP39 8 240 IPR029063 -
Lja4g0014 798 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 490 IPR025771 GO:0000234|GO:0006656
Lja4g0014 798 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 6 486 - -
Lja4g0014 798 SUPERFAMILY Nucleic acid-binding proteins 469 583 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0014 Lja-Chr4 113350 124570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0014 2 484 Acyl Lipid Metabolism Gene Families AT3G18000 70.393 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0014 K05929 - gmx:100820554 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0014 4 113350 124570 Lja4g0014 4 113350 124570 ECH
Lja4g0014 4 113350 124570 Lja2g2196 2 25035293 25041987 PCT