Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5212 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGACCTTCCTCCTTCACCACCTACCACTGTTTCCAAGAGGCTCCGTTGTTCTTCCTCCTCTTCCCCTATTCGTATTTCCCTTCCCTCCACCACCCTCCTCGATCACCTTCGCTCCATTTTCCCTCACATGGATGATCAGGTCCTTGAGAGGGCACTTCAAGAATGCGGCAATGATCTTGATGCTGCTATCAAAAGCCTGCACGGTCTGTGTTTGGGATCTGCTGATGATAATTCTGGAACTGCTCCGCAATCCGAGGCTAATGTCGAGACAGGTGGAGGTGCATTGGAAGATAATGGGGATGCTGCTGCTGCTTCTGCATCTGCTTCGGCTTCTGGGAATCAGGCGGCTTCCAACAATCTGCCTGCTGATGGAGCGGAATGGATTGACTTGTTCGTCAGGGAAATGTCGTTTGCTGCTAGTGTGGATGATGCCAGGGCACGTGCTGCTAGGCTGCTTGAGGTTCTGGAGAAATCGATCACTGCGCATGCAGGCTCCGAGGCAACGACTGCTCTTCAAAGTGAAAATTTGATGCTGAAGGATCAAATTGAAGTGTTGACTAAGGAGAAAAATTGTTTCAAAAGTGCATTTAGAATCCAGCTTGAACGCCTTTCTGATTATGAGGCAAAGAACCAAGAGTTGCAGCAGTTGAAGCAGTTGGTGTCTCAATATCAGGAGCAGATCAGAACTCTTGAGGTGAGTAACTATACTTTGAGAATGCATTTGAACCAGGCACAACAGTACAACCCTTTTCCTGGGCGTTTCCCTCCCGATGCCTTCTAA 822 0.4891 MSAAVCGSKRSFFEDLPPSPPTTVSKRLRCSSSSSPIRISLPSTTLLDHLRSIFPHMDDQVLERALQECGNDLDAAIKSLHGLCLGSADDNSGTAPQSEANVETGGGALEDNGDAAAASASASASGNQAASNNLPADGAEWIDLFVREMSFAASVDDARARAARLLEVLEKSITAHAGSEATTALQSENLMLKDQIEVLTKEKNCFKSAFRIQLERLSDYEAKNQELQQLKQLVSQYQEQIRTLEVSNYTLRMHLNQAQQYNPFPGRFPPDAF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5212 273 MobiDBLite consensus disorder prediction 91 132 - -
Lja3g5212 273 ProSiteProfiles CUE domain profile. 42 88 IPR003892 GO:0043130
Lja3g5212 273 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 273 - -
Lja3g5212 273 Pfam CUE domain 47 79 IPR003892 GO:0043130
Lja3g5212 273 Gene3D - 42 86 - -
Lja3g5212 273 MobiDBLite consensus disorder prediction 118 132 - -
Lja3g5212 273 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 273 - -
Lja3g5212 273 SUPERFAMILY UBA-like 44 87 IPR009060 GO:0005515
Lja3g5212 273 CDD CUE 46 80 - -
Lja3g5212 273 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g5212 273 Coils Coil 210 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5212 Lja-Chr3 94430257 94433107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5212 - - gmx:100815998 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5212 3 94430257 94433107 Lja3g5212 3 94430257 94433107 ECH
Lja3g5212 3 94430257 94433107 Lja3g2157 3 25281008 25284727 PCT