Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5206 ATGATGGCTTCTGATTCTGACTCTTCCGCCGCCGCAGAAAAGATGAAAGACAGTTTCGTCGTAGAAGATGAGCATGTTTCCAACGAAGAGATCCATCTCACGGTGCTAAAAACCTCCCTCTTCTTCGCCGGTGATGGATTCACCGTGTATGATTGTAAGGGTGAACTCGTTTTCCGCGTTGACTCGTATGGACCTGACAGCAGCGACACGGATGAGCTTGTTCTTATGGATCCCAACGGTCGTTGTCTTCTCACCGTTCGCCGGAAGAGGCCTAGTTTACATCAACGGTGGGAAGGCTTCAAAGGTGAGAGATCGGACGGTGACAAACCAATCTTCAGCGTGAAGAGAGCATCGATCATCGGACGATCGAGTGTGACAGTGGAGGTGTACGATAGCCCAGGTGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGTTCCTGCACATTTTTCAACATGATGAAGGAATCAGTGGCTGAGATTCATCGTAAGGTGGACCCCACCACAGGTGTCATGCTTGGGAAGGAGGTGTTTTCTCTTAGCGTGAAGCCTGGTTTTGATGCTGCTTTTGCCATGGGTTTTGTGCTTGTTCTTGATCACATCAGCGGTGAGAGTTTCTTTGATGATGATGATGATGCCACAGCTGAGCCTACAGTGCACCCTACTATTACTACACAAGATTAG 684 0.4942 MMASDSDSSAAAEKMKDSFVVEDEHVSNEEIHLTVLKTSLFFAGDGFTVYDCKGELVFRVDSYGPDSSDTDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERSDGDKPIFSVKRASIIGRSSVTVEVYDSPGEEYQIEGCFSQRSCTFFNMMKESVAEIHRKVDPTTGVMLGKEVFSLSVKPGFDAAFAMGFVLVLDHISGESFFDDDDDATAEPTVHPTITTQD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5206 227 PANTHER LURP-ONE-LIKE PROTEIN 27 213 - -
Lja3g5206 227 MobiDBLite consensus disorder prediction 208 227 - -
Lja3g5206 227 PANTHER - 27 213 IPR007612 -
Lja3g5206 227 SUPERFAMILY Tubby C-terminal domain-like 19 201 IPR025659 -
Lja3g5206 227 Pfam LURP-one-related 19 197 IPR007612 -
Lja3g5206 227 Coils Coil 225 227 - -
Lja3g5206 227 Gene3D - 17 205 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5206 Lja-Chr3 94356571 94358594 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5206 - - gmx:100787085 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5206 3 94356571 94358594 Lja3g5206 3 94356571 94358594 ECH
Lja3g5206 3 94356571 94358594 Lja3g2148 3 25135158 25137607 PCT