Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2148 ATGACGGAAGAGCTGGTTGTGCAAGATGGGTATGTGTTCACTCAAGAGACCCAACTCACTGTTCTCAAAACCTCTCTGTTCTTCGCCGGTGATGGCTTCACCGTCTACGATTGTAAGGGCCAATTGGTTTTCCGATTCGACTGCTACGGACCCTCCACTCGTGACAAGGACGAGCTAGTTCTCATGGATCCCCAAGGTCATTCTCTTCTCACCCTCCGCCGAAAGAAACCGAGTCTTCATCAACGGTGGGAAGGCTTCAGAGGGGAGAGAACGGACGGTGATAAACCAATGTTCAGCGTGAAGAGATCTTCAATAATCGGACGGTCACGGACTACCTTGACGGTGGAGGTGTACGATAACCCCGGTGTGGAGTATCTCATCGAAGGGTGTTTCCCGCAGCGTTGTTGCAAGATTTACAACTCCACTCGAAAATTAGTGGCTGAGATTCGTCGCAAGGTGGACCCCACCACCAGCGTTATGCTTGGGAAGGAAGTGTTCATGCTTTGCGTTCAACCTGGTTTTGATGGGTCCTTCGCCATGGGGTTGGTCCTAGTGCTTGATCAGATCAACGGTGAGAATTTCTTTGATAGTGGAATCACGACGGAGCCTGCTGTGCACCCTGCTACAGAAGATTGA 636 0.5094 MTEELVVQDGYVFTQETQLTVLKTSLFFAGDGFTVYDCKGQLVFRFDCYGPSTRDKDELVLMDPQGHSLLTLRRKKPSLHQRWEGFRGERTDGDKPMFSVKRSSIIGRSRTTLTVEVYDNPGVEYLIEGCFPQRCCKIYNSTRKLVAEIRRKVDPTTSVMLGKEVFMLCVQPGFDGSFAMGLVLVLDQINGENFFDSGITTEPAVHPATED* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2148 211 Pfam LURP-one-related 6 185 IPR007612 -
Lja3g2148 211 PANTHER - 5 200 IPR007612 -
Lja3g2148 211 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
Lja3g2148 211 Gene3D - 4 193 IPR038595 -
Lja3g2148 211 PANTHER LURP-ONE-LIKE PROTEIN 5 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2148 Lja-Chr3 25135158 25137607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2148 - - lja:Lj3g3v2200260.1 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2148 3 25135158 25137607 Lja3g2148 3 25135158 25137607 ECH
Lja3g5206 3 94356571 94358594 Lja3g2148 3 25135158 25137607 PCT