Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5201 ATGGCTTCTTCTATCTCACAGGGTGTGGTTTTCACCACAGCTATGCTCGCATCTAGCACCATGCTTTATCTTGCTTTCTCTTGGCAAAAGATTACCCCACTTTTCCAAATTCATGGGAATCCCTATTCTCATGACTCTGACACAAAAATGTTACGCTCTTGTTTGTGTTCTGAGGAAAAGAAAAGGGAGAGAAAGATGACAATGAAGAAGAAGAAGAAGAAGAAAGTTCAATTTGCAGATAATGTGAAAGAAGCTGCTGAAACAGAGGAGCCAAAACAGAGGAGGAAGAAAAACAGAGTAGTACCAAGCAACAGCTACAGACAACATGAGGAAACCTCGGAAATTCCGAAAATGCCGGCTAACAGAATTGCTTTGTATAATGGGATTTTGAGGGACAGGTTTCATAGGATGGAGGTGCGCACTTATTGA 429 0.4149 MASSISQGVVFTTAMLASSTMLYLAFSWQKITPLFQIHGNPYSHDSDTKMLRSCLCSEEKKRERKMTMKKKKKKKVQFADNVKEAAETEEPKQRRKKNRVVPSNSYRQHEETSEIPKMPANRIALYNGILRDRFHRMEVRTY* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5201 142 Coils Coil 69 89 - -
Lja3g5201 142 MobiDBLite consensus disorder prediction 77 97 - -
Lja3g5201 142 PANTHER PROTEIN, PUTATIVE-RELATED 3 139 - -
Lja3g5201 142 PANTHER TRANSMEMBRANE PROTEIN 3 139 - -
Lja3g5201 142 MobiDBLite consensus disorder prediction 61 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5201 Lja-Chr3 94317305 94317929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5201 - - lja:Lj3g3v0065560.1 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5201 3 94317305 94317929 Lja3g2140 3 25070113 25070971 PCT