Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2140 ATGGCTTCTTCAATCTCACATGGTCTTGTTCTCACCACCGCTATGGTTTTCTCAGCCACTGTCCTCTATCTTGCTTTCTCTCAAACCCCTCACTCTAATCAACCAATTCTTCGCTCTTGTTTATGCTCAGAGGAAAAGAAGAAGGAAATGAAAAGGAAGAAGAAGAGAGTGAAATTTGCAAAAAATGTGATGGTGAAGGTGGTGCTGAAGGAAGAAGAGACAGATATTAATGATGAAATTGGAGAAGAACAGGGGAAGAAGAAGAAGAAGAAGAACAGAGCATCATCATCATCAATCAGCAGCAACTGCAGAAATGAAAACCCAGAAAGCCGTGGAAATGGAATGCCAGCGAATCGAATGGCTCTGTATAACGGGATTTTGAGGGATCGTGGGAACAGGGTGGCGTGCTGTCACTGA 417 0.4341 MASSISHGLVLTTAMVFSATVLYLAFSQTPHSNQPILRSCLCSEEKKKEMKRKKKRVKFAKNVMVKVVLKEEETDINDEIGEEQGKKKKKKNRASSSSISSNCRNENPESRGNGMPANRMALYNGILRDRGNRVACCH* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2140 138 MobiDBLite consensus disorder prediction 95 112 - -
Lja3g2140 138 Coils Coil 43 63 - -
Lja3g2140 138 MobiDBLite consensus disorder prediction 76 117 - -
Lja3g2140 138 PANTHER TRANSMEMBRANE PROTEIN 3 137 - -
Lja3g2140 138 PANTHER PROTEIN, PUTATIVE-RELATED 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2140 Lja-Chr3 25070113 25070971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2140 - - lja:Lj3g3v2188220.1 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5201 3 94317305 94317929 Lja3g2140 3 25070113 25070971 PCT