Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5185 ATGAAGGAAAGTGGGGGAAATCCTCTGCGTCTAAAGTCTGTGAATCACATCTCCCTCATCTGCACTTCAGTGGAAGAATCTATGAACTTCTACCAGAATGTTCTTGGATTTATCCCCATCAGGAGGCCAGGGTCATTTGATTTTGATGGAGCTTGGCTATTTGGCTATGGAATTGGAATTCACTTGCTGCAAGCAGAGGACCCTGAGAATATTCCAAGGAAGACAGAGATTAATCCAAAGGATAATCACATATCATTTCAGTGTGAAAGCATGGGGGCAGTGGAGAAGAAGCTAAAGGAGATGGAAATCGGTTACGTGCGAGCCATGGTGGAGGAAGGTGGGATCCAAGTAGATCAGCTGTTTTTCCATGACCCAGATGGTTTCATGATTGAGATATGCAATTGTGATAGCCTCCCTGTAATTCCCTTAGCAGGTGAAATGGTGAGATCATGTTCAAGAGTGAACCTTGAGATGATGCAGCAGCAAATACACCAAGTTGTCAAGCAAATGTGA 513 0.4405 MKESGGNPLRLKSVNHISLICTSVEESMNFYQNVLGFIPIRRPGSFDFDGAWLFGYGIGIHLLQAEDPENIPRKTEINPKDNHISFQCESMGAVEKKLKEMEIGYVRAMVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLAGEMVRSCSRVNLEMMQQQIHQVVKQM* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5185 170 PANTHER BNAC05G11680D PROTEIN 1 167 - -
Lja3g5185 170 CDD VOC_like 14 132 - -
Lja3g5185 170 Gene3D - 3 163 IPR029068 -
Lja3g5185 170 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Lja3g5185 170 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Lja3g5185 170 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 134 IPR029068 -
Lja3g5185 170 PANTHER - 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5185 Lja-Chr3 94172394 94174726 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5185 - - rcu:8282307 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5185 3 94172394 94174726 Lja3g5185 3 94172394 94174726 ECH
Lja3g5185 3 94172394 94174726 Lja3g2132 3 24943194 24944901 PCT