Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2132 ATGAAGGACAGTGTGGGAAACCCTTTGCATCTCAAGTCTGTGAACCATATCTCCCTCATATGCAGATCAGTGGAAGAATCAATGGCTTTCTACCAGGATGTTCTTGGTTTTTTCCCAATCAGGAGGCCAGGCTCTTTTGATTTTGATGGGGCATGGCTATTTGGGTACGGTATTGGAATTCATTTGCTAGAAGCAGAGAACCCTGAGAAATTGCCCAGGAAGAAGGAAATTAATCCAAAGGATAATCACATATCTTTCCAGTGTGAGAGCATGGGGGCAGTGGAGAAGAAGCTGAAGGACATGGAGATCGCTTACGTGCGAGCGACGGTGGAGGAAGGCGGGATTCAGGTGGATCAGCTGTTTTTCCATGACCCTGATGGGTTTATGATTGAGATATGCAACTGTGATAGCCTCCCTGTGATCCCATTAGCGGGTGAACTTGCAAGATCATGCTCTCGTTTGAACCTTCAGACCATGCAGAATCAGCCGCAGCAGCAGATACACAAAATGGTCCAGTAA 519 0.4682 MKDSVGNPLHLKSVNHISLICRSVEESMAFYQDVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPRKKEINPKDNHISFQCESMGAVEKKLKDMEIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLAGELARSCSRLNLQTMQNQPQQQIHKMVQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2132 172 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 134 IPR029068 -
Lja3g2132 172 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Lja3g2132 172 PANTHER - 1 171 - -
Lja3g2132 172 CDD VOC_like 14 132 - -
Lja3g2132 172 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Lja3g2132 172 Gene3D - 3 172 IPR029068 -
Lja3g2132 172 PANTHER BNAC05G11680D PROTEIN 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2132 Lja-Chr3 24943194 24944901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2132 - - pvu:PHAVU_010G154400g 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2132 3 24943194 24944901 Lja3g2132 3 24943194 24944901 ECH
Lja3g5185 3 94172394 94174726 Lja3g2132 3 24943194 24944901 PCT