Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5155 ATGCCTTCACTCTCAGAAGCTTACAGAGGCCACCCCGTGCATGTGTTTCACCACAAGCACCCTGACTTCAACTCCATACAAAAACTTCCAGAATCTTACACTTGGAGTAATGATCATGATCACACTACTACAACTACTACTTCCAATTGTAGTGTCCCTGTTATTGATCTCAGTGACCCTAATGCATCAAAGCTTATAGGACATGCATGCAAGACATGGGGTGCGTTCCAAGTGGTGAACCATGGCGTCCCCTTGAGCCTTCTTGATGACATGAACTGGGTTGGACACACCCTCTTCTCCCTCCCATCTCACCAAAAGCTCAAGGCGGCTCGTTCTCCCGATGGTGTTTCTGGCTACGGCCTCGCTCGCATCTCCTCCTTCTTCCCTAAACTCATGTGGTCGGAGGGCTTCACGATCGTCGGATCGCCTGTTGACCATTTCCGCCAGCTCTGGCCACAGGATTATGCCAAATACTGTGACATTGTGGTGCAATACGATGAAACCATGAAAAAGCTAGCGGGAAATTTAATGAGCCTCATGTTGGAGCCTCTAGGCATTACAAAGGAAGACCTCAAATGGGCCGGCAAAAAAGGGCAATTCAAAAAGGCCAATTGTGCTGCCATGCAGTTAAACTCGTACCCGAGCTGCCCGGATCCTGATCGGGCCATGGGTCTCGCCCCGCACACCGACTCCACCCTTCTCACAATCCTCCATCAGAACGACATTAGCGGGTTGCAGGTCCAGCAGGAAGGCACCCCCGGGTGGGTGACGGTCCCACCACTCCCCGGTGCCCTCGTGGTCAACGTTGGCGACCTCCTTCATATATTGTCAAACGGGTCGTACCCGAGTGTGCTGCACCGAGTAGTTGTGAACCGAATCCGCCAGAGGTTCTCAGTCGCTTACCTATATGGGCCCCCGCCCAACGCGGAGATTTGTCCACATGCGAAGCTAGTGGGACCTACTCAGCCTCCACTTTATAGGTCAGTGACTTGGAATGAGTATCTTGGCACAAAAGCGAAATATTTCAACAAGGCACTCTCATCCGTAAGGCTTCGTGCATCATCCATTAACGGATTGTTTGATGTAAACGAGACTCATCACCACAAAAGCACGGTGCAAGTGGGTTAA 1128 0.5142 MPSLSEAYRGHPVHVFHHKHPDFNSIQKLPESYTWSNDHDHTTTTTTSNCSVPVIDLSDPNASKLIGHACKTWGAFQVVNHGVPLSLLDDMNWVGHTLFSLPSHQKLKAARSPDGVSGYGLARISSFFPKLMWSEGFTIVGSPVDHFRQLWPQDYAKYCDIVVQYDETMKKLAGNLMSLMLEPLGITKEDLKWAGKKGQFKKANCAAMQLNSYPSCPDPDRAMGLAPHTDSTLLTILHQNDISGLQVQQEGTPGWVTVPPLPGALVVNVGDLLHILSNGSYPSVLHRVVVNRIRQRFSVAYLYGPPPNAEICPHAKLVGPTQPPLYRSVTWNEYLGTKAKYFNKALSSVRLRASSINGLFDVNETHHHKSTVQVG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5155 375 SUPERFAMILY Clavaminate synthase-like 15 341 - -
Lja3g5155 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 305 IPR005123 -
Lja3g5155 375 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 350 - -
Lja3g5155 375 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 350 - -
Lja3g5155 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 153 IPR026992 -
Lja3g5155 375 Pfam 2OG-Fe(II) oxygenase superfamily 207 305 IPR044861 -
Lja3g5155 375 Gene3D - 21 344 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5155 Lja-Chr3 93913679 93915626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5155 26 346 Glycosyltransferase AT5G59530 30.769 1.16e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5155 K04124 - gmx:100798572 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5155 3 93913679 93915626 Lja3g5155 3 93913679 93915626 ECH
Lja3g5155 3 93913679 93915626 Lja3g2103 3 24531958 24534875 PCT