Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5143 ATGGAGGAAAGCAACAATAGAGGGGAATTTCTGGCTAAACAGTCTTCACTAAGGTCTGGTGGTGGCAGTTTTAAATCAACATTATCAGGAAGGTCAACCCCTCGAAATTCCCCATCATTTCGGCGATTTAATTCAATCAGAACACCGAGAAAAGAAGGAAGGGGTGGTGTAGGTGGTGGTGCACTGTGGTTTCGGAGTAACCGCGTGCTGTTGTGGTTGCTTCTGATCACCCTCTGGGCTTATCTTGGGTTTTTTGTTCAGTCCAGGTGGGCACATAGTGATAAGAAGGAGGAATTTTCTGGTTTTGGAACGGGGCCGAGAAACACCAACTCAGATGATGAACCAAGTCACCACCGCGATTTGCTAGCTAGTGATAATAGCTCCTTGTCTGCTAATAATGAGACAGATAGAAATAAAGCAGGTATTGTTGGTAAAATAATAAATGTAGCTTTGGCTAAGAAAGAAAATGATGTTCCATCTCAAAGTAAAACTAAATCAAAGAAGAGGAGCAGACGATCTGTTCGCACTTCAAAAGGTAAAGCTCGTGGTAGTAAGCAGAAACGAACACCGGAAGTTAAGAACAGTGATATAGAGGAGCCGGAGCCAGAAATTCCTGATACCAATAGTACATATGGAATGCTTGTTGGCCCATTTGGGGCATCAGAAGATAGGATTCTGGAATGGAGTCCTCAGAAGCGGTCCGGGACATGTAACCGGAAGGAGGACTTTGCGCGTCTTGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCGATGACTGGAGCTCCGCTTTCAATGATGGAGTTGGCAACAGAGCTTTTGAGCTGTGGAGCCACTGTTTCTGCTGTTGTGCTTAGCAAGAAGGGTGGTTTGATGTCAGAGCTCACTAGAAGGCGAATCAAGGTTCTTGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTGATTGCTGGTTCAGCTGTTTGTGCATCATGGATTGAACAATACATTGAACGTTTTCCTGCTGGTGCGAGCCAAGTTGCTTGGTGGATTATGGAAAATCGTCGAGAGTACTTTGATCGTTCAAAGGGTGTCTTGGACAGAGTAAAAATGTTGGTTTTTCTATCTGAATCACAATCTAAACAATGGCAAAAATGGTGTGAGGAAGAACGCATAAAACTAAGAGCCAGCCCAGAAATTGTTCCATTGTCTGTTAATGATGAACTGGCATTCGTAGCTGGCATTCCTTCTACGCTTAACACTCCATCCTTCAGTACAGAGAAAATGATTGAGAAAAGGCAGTTGTTGCGAGAATCAGTCCGAGGTGAAATGGGCTTAACAGATAATGATATGCTTGTGATATCTCTGAGTAGCATCAACCCTGGTAAGGGCCAGCTATTACTTCTTGAGTCAGCAAGCTCAGTAGTAGAAAGTGGACAGCTGCAAGATGATGAGGAAATGAAAAAATCAACAAATATAAGGGAAGGTCTAGCTACCGTGACTAGAAGGCGGCGTGCTCGAAAATTGTTACCGTCATTGAAGGGTGGAAAAATGACTTCCTTAAGCAGAAAGAAACAAGTGTTGGCTAACATCAAAGGAACAATGCAACAATCACTCAAAGTTCTCATTGGTTCTGTTGGATCTAAAAGTAACAAGGGGGATTATGTTAAAGGCCTTCTGAATTTCTTGGCACTGCATCCAAACACTTCAAAAGCAGTTTTGTGGACTCCATCCACAACATGGGTTGCCTCACTTTACTCTGCTGCAGATGTTTATGTCATAAACTCTCAGGGTCTAGGAGAAACATTTGGAAGGGTGACTATAGAAGCAATGGCGTTTGGTCTTCCGGTTCTTGGAACGGATGCTGGGGGAACTCAGGAGATTGTTGAGCACAATGTTACAGGCCTTCTACATCCTGTTGGACATCCAGGGAGTGATGTCCTTGCGCGGAATCTCCGGTTTTTACTTAAAAACCAGTTGGTAAGGAAGCAAATGGGAACAGAAGGAAGTAAGAAAGTGCAGAAGATGTACTTGAAACAACACATGTATAAGAAATTTGTAGAGGTCATTGTCAGATGCATGAGAAGCAAATAA 2094 0.4327 MEESNNRGEFLAKQSSLRSGGGSFKSTLSGRSTPRNSPSFRRFNSIRTPRKEGRGGVGGGALWFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNSDDEPSHHRDLLASDNSSLSANNETDRNKAGIVGKIINVALAKKENDVPSQSKTKSKKRSRRSVRTSKGKARGSKQKRTPEVKNSDIEEPEPEIPDTNSTYGMLVGPFGASEDRILEWSPQKRSGTCNRKEDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMSELTRRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIERFPAGASQVAWWIMENRREYFDRSKGVLDRVKMLVFLSESQSKQWQKWCEEERIKLRASPEIVPLSVNDELAFVAGIPSTLNTPSFSTEKMIEKRQLLRESVRGEMGLTDNDMLVISLSSINPGKGQLLLLESASSVVESGQLQDDEEMKKSTNIREGLATVTRRRRARKLLPSLKGGKMTSLSRKKQVLANIKGTMQQSLKVLIGSVGSKSNKGDYVKGLLNFLALHPNTSKAVLWTPSTTWVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPVGHPGSDVLARNLRFLLKNQLVRKQMGTEGSKKVQKMYLKQHMYKKFVEVIVRCMRSK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5143 697 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 257 690 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 1 57 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 97 136 - -
Lja3g5143 697 PANTHER BNAA05G14870D PROTEIN 1 697 - -
Lja3g5143 697 Pfam Glycosyl transferases group 1 528 671 IPR001296 GO:0016757
Lja3g5143 697 Gene3D Glycogen Phosphorylase B; 424 677 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 8 44 - -
Lja3g5143 697 CDD GT4_PimA-like 253 690 - -
Lja3g5143 697 Pfam Glycosyl-transferase family 4 248 417 IPR041693 -
Lja3g5143 697 MobiDBLite consensus disorder prediction 165 183 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 122 136 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 184 200 - -
Lja3g5143 697 PANTHER BNAA05G14870D PROTEIN 1 697 - -
Lja3g5143 697 MobiDBLite consensus disorder prediction 154 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5143 Lja-Chr3 93763662 93768460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5143 22 695 Glycosyltransferase AT3G15940 61.014 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5143 - - gmx:100795000 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5143 3 93763662 93768460 Lja3g5143 3 93763662 93768460 ECH
Lja3g5143 3 93763662 93768460 Lja3g2094 3 24397767 24401590 PCT