Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2094 ATGGAAGAGTGCAACAACAGAGGAGAAGAAGCTCAGGCAAATTCAAGTTCAACCAGACATTTTTCACCAAGGTCAGGTAAGAGTTTGAAATCTTCATTATCTGGAAGATCAACTCCACAGTATTCTCCTTCATTTCAGCGACTACAGTCTAACTTCTCACCAAGAAGAGAAGGAAGAGGAGGTGTAAAGTGGTTTGGTAGAAAGAGGAACCTGTTACTAAGGTGGTTGCTTCTGATTACCTTCTGGGCTTATCTTGTGTTCTTTGTTCAGTCCAAGTGGGCTCATGGTGATAAAGAAGAGGAATTTTCAGGCTTTGGAAGAAAGTCAAGTGATTTTGAACAGAATCAGCATCAAGATTTGGTTCCTCAAAACACGTCCTTATCTTTCATTAATAATAAAACTGTGGAGAGTATGGTGGAGATTGGTGACACAGTGGTTGTGGCTCTGGCAAAGAAAGAAAATAGTGTTCCATCTCGACACAAAACTGGTTCAAAAAGGAGGAGTAGACGGTCAAGGAGTGGTTTGAGAGGTAAACAAAGACAGAAAGTTGAGATCAGTGGTATAGAGGAGTCAGAAATTCCTCTGAGGAATACTACCTATGGATTCCTTGTTGGTCCATTTGATTCAACAGAGGATAGAATTCTGCAATGGGGTCCTGAGAAGCGTTTTGGAACCTGTGACAGGAACGGGGAATTTGCACGCCTTGTTCGGTCGAGGAGGTTTGTGTTGGTGTTTCATGAGCTTTCTCTGACTGGAGCTCCACTTTCAATGATGGAGTTGGGAAGTGAACTATTGAGTTGTGGGGCAACTGTTTCAGCTGTTGTGCTTAGCAAAAAGGGTGGTTTGATGCAAGAGCTTGTTAGGAGACAGATCAAGGTGATTGATGACAAAGCGAATCGCAGCTTCAGAACTGCAATGAAAGCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCTTCATGGATTGAACAATATATTGAACATTTTTCTTCTGGGGCAAGTCAAGTTGTTTGGTGGATTATGGAAAACCGGCGAGAGTACTTTGATCGTTCAAAGGATGTCTTGCACAGAGTAAAGATGCTGGTTTTTCTCTCTGAATCACAATCTAAGCAATGGCAGAACTGGTGTGCAGAAGAAATCATAGAATTGAGATCCCAAATCACAGTTGTTCCATTATCTGTTAATGAAGAACTGGCTTTTGTAGCTGGCATTCATTCTACACATAATGGTTCATCCTTCAGTGCTGAGAAGATGGATGAGAAGAGAAAGTTGTTGCGCGATTCAGTTCGAAGAGAAATGGGCTTGAATGATAATGATATGTTAGTGTTGTCTCTGAGTAGCATCAACCCTGGGAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGTTCAATAGTATATCATGGACCATTGCCAAATGATAAGAAAATGCAGAAATCATTAGAGGCTGAGGAACACTCATCTACCCTGATTAGGAAACACCATAATAGAAAATTGTTGCCATTGTTGGAGGATAGCAGGGTAGCTTTGACCAATATCTCAAGGAATTCAACTAACGGAACAAGGAAAGTAGTGTTGTCCCGCAACAATGGAACAATGGAACATTCTCTCAAGATTCTAATTGGTTCTGTGGGATCTAAGAGTAACAAGGTGGATTATGTTAAAGGTCTTCTAAGTTTCTTAGAACAGCATTCAAACTTGTCCAAGGAAGTTTTGTGGACACCAGCCACAACACGTGTAGCCTCACTTTACTCTGCTGCAGATGTTTATATCATAAACTCTCAGGGATTGGGAGAAACGTTTGGGCGGGTGACAATAGAAGCAATGGCATTTGGTCTTCCGGTACTTGGAACAGATGCTGGGGGAACACTAGAGATTGTGGAGCATAATGTGACAGGTCTTCTTCACCCTATTGGACGCCCAGGGAATCGTGTCCTTGCGCAAAATCTCAGGTTTTTACTTGAAAATCGATTAGCAAGAGAGCAAATGGGGATGAATGGAAGAAAGAAGGTGCAGAGAAAGTACTTGAAGCAGCGCATGTATGAGAAATTTGCAGAGGTTCTTATCCGGTGTATGAGAAGCAAATAA 2085 0.4197 MEECNNRGEEAQANSSSTRHFSPRSGKSLKSSLSGRSTPQYSPSFQRLQSNFSPRREGRGGVKWFGRKRNLLLRWLLLITFWAYLVFFVQSKWAHGDKEEEFSGFGRKSSDFEQNQHQDLVPQNTSLSFINNKTVESMVEIGDTVVVALAKKENSVPSRHKTGSKRRSRRSRSGLRGKQRQKVEISGIEESEIPLRNTTYGFLVGPFDSTEDRILQWGPEKRFGTCDRNGEFARLVRSRRFVLVFHELSLTGAPLSMMELGSELLSCGATVSAVVLSKKGGLMQELVRRQIKVIDDKANRSFRTAMKADLVIAGSAVCASWIEQYIEHFSSGASQVVWWIMENRREYFDRSKDVLHRVKMLVFLSESQSKQWQNWCAEEIIELRSQITVVPLSVNEELAFVAGIHSTHNGSSFSAEKMDEKRKLLRDSVRREMGLNDNDMLVLSLSSINPGKGQLLLLESASSIVYHGPLPNDKKMQKSLEAEEHSSTLIRKHHNRKLLPLLEDSRVALTNISRNSTNGTRKVVLSRNNGTMEHSLKILIGSVGSKSNKVDYVKGLLSFLEQHSNLSKEVLWTPATTRVASLYSAADVYIINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTLEIVEHNVTGLLHPIGRPGNRVLAQNLRFLLENRLAREQMGMNGRKKVQRKYLKQRMYEKFAEVLIRCMRSK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2094 694 CDD GT4_PimA-like 252 687 - -
Lja3g2094 694 Gene3D Glycogen Phosphorylase B; 413 674 - -
Lja3g2094 694 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 243 687 - -
Lja3g2094 694 PANTHER BNAA05G14870D PROTEIN 1 694 - -
Lja3g2094 694 MobiDBLite consensus disorder prediction 1 59 - -
Lja3g2094 694 Pfam Glycosyl-transferase family 4 238 405 IPR041693 -
Lja3g2094 694 MobiDBLite consensus disorder prediction 8 53 - -
Lja3g2094 694 Pfam Glycosyl transferases group 1 560 668 IPR001296 GO:0016757
Lja3g2094 694 MobiDBLite consensus disorder prediction 154 183 - -
Lja3g2094 694 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2094 Lja-Chr3 24397767 24401590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2094 21 692 Glycosyltransferase AT3G15940 56.835 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2094 - - gmx:100796443 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2094 3 24397767 24401590 Lja3g2094 3 24397767 24401590 ECH
Lja3g5143 3 93763662 93768460 Lja3g2094 3 24397767 24401590 PCT