Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5105 ATGGAGAAGGAAGAAATGGAGGCTGCTTTGATTCATGAGGAAATGGCTCAGCAACACAAGAATCCACTTGTACAAAGAAGCAAGGGTGGCTTCATCACCATGCCTTTCATTATAGCAAATGAGTCACTAGCTAAGCTTGCTAGTGTTGGGCTAATCCCAAACATGATACTGTATTTGACTAAGGATTACAGGGTGAGAGTAGTGAAAGCAACACAGATCATGTACTATTGGTTGGCAGCTACAAATTTCACTCCGGTGGTGGGTGCTGTCATTGCTGATTCATATTTGGGTCGCTTCCTCGCCATTGGTTTGGGTTCAATACTCTGTTTCCTGGGGATGGCAGTGTTGTGGTTAACATCCATGAGTCCAACGGCAAGACCTCCACCTTGTCTTCACTCAACTGAAGATTGCCAATCTGCAACAACAAGCCAATTAGCTCTCCTACTCTCTTGCTTTGCTCTCATATCCATTGGAGGTGGTGGCATCTCATGCTCCTTAGCATTTGGTGCTGATCAGCTCAAGAAAAAAACTGATCCTGATAACCAAAGGGTCTTGGAGAGCTTCATAAGCTGGTACATAGCTTTGCAAGCCATTGCTGTTGTTTTTTCTTTGACAGGAATAATTTACATCCAAGATCATTTTGGATGGAAACTGGGTTTTGGGGTTCCTGCAGCACTTATGCTCTTGTCCACTTTCCTATTCTTCATTATTTCTCCACGTTATATCAAGCAGAAACCTCACAGTAGTATTTTAACTAGCCTTGCCCAAGTAACAGTTGTTGCCTACAAGAATAGAAAACTTGCATTTCCCCCTAAGGACTCAGCTGGAATGTATCACCATGAGAAGGATTCAACACTCGTTGCTCCATCTGACAAACTGAGGTTTCTGAATAAAGCTTGCATCATCAAAGATAGAGAAAAAGATATAGCCTCTGATGGATCAGCCTCAAGCACATGGAGTCTTTGTACAATAGAGCAAGTGGAAGGACTAAAAGCCATCATCAAAGTGATTCCCCTTTGGTCTTCCAGCATCATGATATCAGTAAGCACTAGCCAAACCTCATTTCGGTTGCTCCAAGCTAAAACTATGGACAGACACATCACTCCAAGCTTCGAAATTCCTGCAGGCTCTTTTGGTCTCTTCTCAATGGTGTCAGTATTCATAACTGCGGGCGTCTACGATCGTGTGATCCTCCCTCTAGCATCAAAACTCAGAGGAAAATCAGTTTCTATCAGTGCGAAAAAGAGAATAGGAATTGGGCTGTTTTTCTCTTTTCTGGACTTTGTAGTTTCAGCAGTTATTGAAACCATAAGGAGAAGGAGAGCAGTTGAGGAAGGGTACATTGATGATCCTCAAGCAGTGTTGAACATGTCTGCAATGTGGCTTATCCTGCATCATGTTTTGACTGGTATGGCTGAAGCATTCAATGCAATAGGCCAATCAGAATTCTATTACTCCGAGTTTCCAAGCAGCATGTCAAGCATTGCTGCTTCCCTCTTCAGCCTTGGAAATGCTGTGGGAAACTTGGTGGCTTCTATGATATTCAGGATTGTGGATGACATTACTTCCAGAGGGGGAAAACAAAGTTGGGTCTCAGATAATATCAACAAGGGTCACTATGACAAGTTTTACTGGCTTCTTACCATGATGAGTTTTGTTAACATGCTGTACTATTTGGTTTGTAGTTGGGGTTATGGACCAAGTGCAGAAGCTGAACAAGGGAATAATACTAATGTTCACTGTGAGCCAGAGGAGGCAAAGCAAGGTTCCAATGGGGAACAAATTCTGAATCCTAGATAA 1800 0.4278 MEKEEMEAALIHEEMAQQHKNPLVQRSKGGFITMPFIIANESLAKLASVGLIPNMILYLTKDYRVRVVKATQIMYYWLAATNFTPVVGAVIADSYLGRFLAIGLGSILCFLGMAVLWLTSMSPTARPPPCLHSTEDCQSATTSQLALLLSCFALISIGGGGISCSLAFGADQLKKKTDPDNQRVLESFISWYIALQAIAVVFSLTGIIYIQDHFGWKLGFGVPAALMLLSTFLFFIISPRYIKQKPHSSILTSLAQVTVVAYKNRKLAFPPKDSAGMYHHEKDSTLVAPSDKLRFLNKACIIKDREKDIASDGSASSTWSLCTIEQVEGLKAIIKVIPLWSSSIMISVSTSQTSFRLLQAKTMDRHITPSFEIPAGSFGLFSMVSVFITAGVYDRVILPLASKLRGKSVSISAKKRIGIGLFFSFLDFVVSAVIETIRRRRAVEEGYIDDPQAVLNMSAMWLILHHVLTGMAEAFNAIGQSEFYYSEFPSSMSSIAASLFSLGNAVGNLVASMIFRIVDDITSRGGKQSWVSDNINKGHYDKFYWLLTMMSFVNMLYYLVCSWGYGPSAEAEQGNNTNVHCEPEEAKQGSNGEQILNPR* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5105 599 MobiDBLite consensus disorder prediction 573 599 - -
Lja3g5105 599 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT 19 574 - -
Lja3g5105 599 CDD MFS_NPF1_2 34 565 - -
Lja3g5105 599 Pfam POT family 100 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g5105 599 Gene3D MFS general substrate transporter like domains 3 572 IPR036259 -
Lja3g5105 599 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja3g5105 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g5105 599 SUPERFAMILY MFS general substrate transporter 48 562 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5105 Lja-Chr3 93411990 93416011 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5105 12 585 Organic Solute Cotransporters AT1G52190 54.905 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5105 - K14638 gmx:100782867 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5105 3 93411990 93416011 Lja3g2039 3 23756663 23760650 PCT