Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2039 ATGGAGAAGGAAGTAGTGGAGATTTCTCAAAATGAAATGGAAATGGCTTCCCAAAACATTTCACAAAAACCACAAAGAAGCAAGGGTGGCCTTGTCACCATGCCTTTCATCATAGCAAATGAAGCACTTGCGAATGTGGCAACAATTGGTCTTCTTCCGAACATGATATTGTATTTGATGGGGAGTTACAACATTCATATGGCCAAAGCAACTCAGATCAACCTTTTGTCATCCGCAGCAACCAATGTCACGCCTGTGTTGTGTGCTTTCATTGCTGATTCTTATCTGGGTCGATTTCTCGTTGTCGGCTTAGGTTCCATAGTTACTCTCCTGGGAATGGCGCTCTTGTGGCTAACAGCCATGATACCACAGGCACGCCCTTCTCCTTGCAACTCAGCAACAAAAACATGTAAACCAGCAACAACTAAGCAAATGACAATGTTAATCTCTTCCCTTGCTCTCATGTCAATTGGAAAAGGTGGCCTTTCATGCTCTCTGGCATTTGGCGCAGACCAGGTCAACAGAAAAGACAACAACTCCAATAAACAGAGAGCCTTGGAAATATACTTTAGTTGGTATTATGCTTTTGTAGCTATTTCTGTCATAATTGCTCTCACAGGAATAGTTTATATCCAAGATCATCTTGGATGGAAATTGGGTTTTGGAGTTCCTACAGCACTAATGCTCTTGTCAACTATCTTTTTCTTCCTTGCTTCTCCACTTTATGTGAAGAATCAAATACAAGATAGCTTGATCACTGGCTTTGCACGCGTAATCGTCGTGGCCTATAAGAACAGGAAACTTCCATTACCAGCAGGGAACTCAGCTGGAATACTGTATCATCGTAAGAAGGACACGAATCTTGTTGTTCCAACTGATAAATTGAGGTTTCTGAATAAAGCTTGCCTCATTAAAGACCATGAAAAAGATATAGCCTCTGATGGGTCACCCTCTAATCCATGGAGTCTATGCACAATAGATCAAGTAGAAGAACTAAAAGCCATTATCAAAGTTATTCCACTGTGGTCTACGGGTATCATGATGGTCCTTAACATTGGAGGTTCATTTGGAGTGTTGCAAGCTAAATCCATGAACAGACACATCACTCCAAATTTTGAAGTTCCACCAGGTTCTTTTGGTGTGATCATGGTGATTACAATATTTCTATGGGTGACTCTTTATGATCGTGTCATCATTCCTATAGCATCAAAGCTCAGAGGCAAACCAGTTAGGATCAGTGCCAAGACAAAAATGGGAATTGGGTTGTTTTTCTCTTTTCTTCACCTTGTAACCGCAGCTATTGTCGAGACTATGAGGCGAAAAAGAGCAAGCACTGAGGGATATATCAATGATACTCATGCTGTGTTAAATATGTCTGCAATGTGGCTTGTTCCTCAACTTTTCTTGGGTGGCTTGGCAGAGGCATTCAATGCAATAGGCCAAAATGAGTTCTACTACACAGAGTTTCCCAAAACCATGTCAAGTGTTGCATCATCTCTTCTGGGATTGGGAATGGGGGCAGGAAATGTGATGTCTAGTTTGGTATTCAGTATTGTGCAAAATGTTACTAAAAGAGGGGGAAAGGAGGGATGGGCTGCAGATAATATTAACAAGGGTCACTATGACTGGTACTACTGGGTGCTTGCTGCATTGAGTGTTGTTAATATATTTTATTATCTAATTTGTAGCAAGGCTTATGGACCTACTGTTGATCAAATATCCAAGGTGACAGATGAAAATGGTTCAAATGAAGACAATGGCTTGAAGGAGAAAGAGTCAGGATGA 1785 0.4112 MEKEVVEISQNEMEMASQNISQKPQRSKGGLVTMPFIIANEALANVATIGLLPNMILYLMGSYNIHMAKATQINLLSSAATNVTPVLCAFIADSYLGRFLVVGLGSIVTLLGMALLWLTAMIPQARPSPCNSATKTCKPATTKQMTMLISSLALMSIGKGGLSCSLAFGADQVNRKDNNSNKQRALEIYFSWYYAFVAISVIIALTGIVYIQDHLGWKLGFGVPTALMLLSTIFFFLASPLYVKNQIQDSLITGFARVIVVAYKNRKLPLPAGNSAGILYHRKKDTNLVVPTDKLRFLNKACLIKDHEKDIASDGSPSNPWSLCTIDQVEELKAIIKVIPLWSTGIMMVLNIGGSFGVLQAKSMNRHITPNFEVPPGSFGVIMVITIFLWVTLYDRVIIPIASKLRGKPVRISAKTKMGIGLFFSFLHLVTAAIVETMRRKRASTEGYINDTHAVLNMSAMWLVPQLFLGGLAEAFNAIGQNEFYYTEFPKTMSSVASSLLGLGMGAGNVMSSLVFSIVQNVTKRGGKEGWAADNINKGHYDWYYWVLAALSVVNIFYYLICSKAYGPTVDQISKVTDENGSNEDNGLKEKESG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2039 594 PANTHER PEPTIDE/NITRATE TRANSPORTER 17 579 - -
Lja3g2039 594 Pfam POT family 101 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g2039 594 Gene3D MFS general substrate transporter like domains 4 574 IPR036259 -
Lja3g2039 594 CDD MFS_NPF1_2 34 566 - -
Lja3g2039 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g2039 594 MobiDBLite consensus disorder prediction 575 594 - -
Lja3g2039 594 SUPERFAMILY MFS general substrate transporter 35 563 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2039 Lja-Chr3 23756663 23760650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2039 6 592 Organic Solute Cotransporters AT1G52190 54.882 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2039 - K14638 gmx:100805115 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2039 3 23756663 23760650 Lja3g2039 3 23756663 23760650 ECH
Lja3g5105 3 93411990 93416011 Lja3g2039 3 23756663 23760650 PCT