Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5103 ATGGACAAGGAAGTTGAGCTTGCTTATGCTGCAGTTGAAGATGAATCACAACCACAGAGGCGCAAGGGTGGTCTAATTACCATGCCTTTCATTATTGCAAATGAGGCACTTGCAAGGGTAGCAACCATAGGCCTATTGCCAAACATGATATTGTATTTGATGGGGACTTACAGGCTTCATCTTGGCACAGCAACTCAGATACTTCTCTTGTCTTCTGCAAGCAGCAATTTCACGCCTGTGGTGGGTGCTTTCATTGCTGATTCTTATCTGGGTCGGTTCCTTGCTGTTGGATTAGGTTCTGCCATCACTTTGCTGGGAATGGCACTCCTCTGGCTAACAGCCATGACCCCACAGGCAAGGCCTCCCACTTGCAACCATGCAGCTGAAAGTTGTAAATCAGCAACGTCAGGGCAAATGGCAATCTTGCTCTCTGCTTTTGCTCTCATGTCCATTGGAAATGGTGGCCTTTCATGTTCCTTAGCATTTGGTGCAGACCAGGTGAATAGAAAAAACAACTCCAATAACCCCAGGGTCTTGGAAATATTCTTCACCTGGTACTATGCTTCTACAACTATTGCTGTCATAATTGCCCTCACAGGAATAGTATATATCCAAGACCATCTTGGATGGAAACTTGGTTTTGGAATTCCAGCAGCGCTCATGCTCTTATCTACTGTCTTCTTCCTCCTTGCTTCTCCACTTTATATAAAGAACAAAATACAAACCAGCTTGATCACTGGATTTGCCCAAGTAACTGTTGCTGCATTTAAGAACAGAAAACTTTCATTACCACCTAAGAACTCGGCCGAACTTTACCATCGTAGGAAGGATTCAGATCTTGTTATTCCAACTGATAAACTAAGGTTTCTAAACAAAGCTTGTGTCATCAAGGATCCAAAACAAGATATAACCTCTGATGGGTCAGCATCAGATCCTTGGAGACTTTGCACAATAGATCAAGTAGAGGAACTAAAAGCTATTATCAGAGTCATTCCCTTGTGGTCTTCAGGGATCATGATGTCCCTTAACATTGGAGGCTCATTTGGATTGCTGCAAGCTAAATCCATGAACAGACATATCACCTCTCACTTTGAAGTTCCAGCAGGGTCTTTCAGTGTAATCCTGGTAGCTGTAATATTTCTATGGATAGCTCTCTATGATCGCGCGTTTCTTCCTCTAGCATCGAAGATCAGAGGAAAACCAGTTAGGATCAGTGCAAAGAGAAGAATGGGAATTGGATTGCTTTTCTCTTTTCTCCACTTGGTAACTTCAGCAACCTTGGAGACCATAAGGCGAAAGAGAGCAATTGAGGCGGGATATATCAACAATGCTCATGGAGTGTTGAACATGTCGGCAATGTGGCTGGCCCCTCAGCTTTGCTTGGGTGGCATAGCTGAAGCATTCAATGCAATTGGTCAGAATGAGTTTTATTACACTGAGTTTCCTAGGACTATGTCTAGTGTTGCTTCTTCCCTTCTTGGACTGGGAATGGCTGCAGGGAACATTGTATCTTCTTTTGTATTCAGTGCTGTGGAAAACATTACCTCAAGTGGAGGAAAAGAGGGTTGGGTTTCAGATAACATAAACAAGGGTCGTTTCGACAAGTACTACTGGGTTGTTGTTGGAATTAGTGGTCTTAATTTAGTGTATTATCTAATATGCAGTTGGGCTTATGGACCTACTGTTGATCAAATATCCAAGGTAGCTGAAGAAAACGGCTCCAAGGTTAGTGGAGAAATTGGCTCAAAAGAGAAAGAGTTAACTGAATTGCAGAACGTGGGTCAGGTTGATAAAGTCTCGAAGATTAGTGAAGAAAATGGCTCCAAGGAGGAAGAGTTGTCTGAACTAAGGATTAATGGGGTTCAGGATGAACATTAA 1878 0.4292 MDKEVELAYAAVEDESQPQRRKGGLITMPFIIANEALARVATIGLLPNMILYLMGTYRLHLGTATQILLLSSASSNFTPVVGAFIADSYLGRFLAVGLGSAITLLGMALLWLTAMTPQARPPTCNHAAESCKSATSGQMAILLSAFALMSIGNGGLSCSLAFGADQVNRKNNSNNPRVLEIFFTWYYASTTIAVIIALTGIVYIQDHLGWKLGFGIPAALMLLSTVFFLLASPLYIKNKIQTSLITGFAQVTVAAFKNRKLSLPPKNSAELYHRRKDSDLVIPTDKLRFLNKACVIKDPKQDITSDGSASDPWRLCTIDQVEELKAIIRVIPLWSSGIMMSLNIGGSFGLLQAKSMNRHITSHFEVPAGSFSVILVAVIFLWIALYDRAFLPLASKIRGKPVRISAKRRMGIGLLFSFLHLVTSATLETIRRKRAIEAGYINNAHGVLNMSAMWLAPQLCLGGIAEAFNAIGQNEFYYTEFPRTMSSVASSLLGLGMAAGNIVSSFVFSAVENITSSGGKEGWVSDNINKGRFDKYYWVVVGISGLNLVYYLICSWAYGPTVDQISKVAEENGSKVSGEIGSKEKELTELQNVGQVDKVSKISEENGSKEEELSELRINGVQDEH* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5103 625 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 13 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g5103 625 CDD MFS_NPF1_2 28 558 - -
Lja3g5103 625 MobiDBLite consensus disorder prediction 602 625 - -
Lja3g5103 625 PANTHER PEPTIDE/NITRATE TRANSPORTER 13 581 - -
Lja3g5103 625 Pfam POT family 95 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g5103 625 MobiDBLite consensus disorder prediction 601 625 - -
Lja3g5103 625 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 82 106 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja3g5103 625 Coils Coil 599 619 - -
Lja3g5103 625 Gene3D MFS general substrate transporter like domains 2 566 IPR036259 -
Lja3g5103 625 SUPERFAMILY MFS general substrate transporter 22 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5103 Lja-Chr3 93403264 93406670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5103 16 606 Organic Solute Cotransporters AT1G52190 55.333 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5103 - K14638 gmx:100792940 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5103 3 93403264 93406670 Lja3g5103 3 93403264 93406670 ECH
Lja3g5103 3 93403264 93406670 Lja3g2038 3 23747845 23750959 PCT