Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2038 ATGGAGAAAGAAGTGGAGCTTTCTTCATCAGCTGAACCTAAAATGGCTTCCCAACCCCAACAGCACAAGGGTGGCTTCGTTACCATGCCTTTCATCATAGCAAATGAAGCACTTGCGAGGGTGGCAACGTTGGGTCTGTTGCCAAACATGGTATTGTATTTGATGGGGAACTACCATCTTCATTTATCCCAAGCTACCTACATACTACTTTTATCAGTTGCAACCACTAATTTCATGCCTCTTCCTGGCGCTTTCATTGCTGATTCTTATCTGGGTCGGTTCCTTGCTGTTGGTTTAGGTTCCATCATCACTTTCCTGGGAATGACACTCTTGTGGCTAACAGCCATGATCCCACAGGCACGTCCTCCTCCTTGCAATCCTGCGACTGAAAGCTGTAAATCAGCAACGACTGAGCAAATGACAATGTTAATCTCTTCCCTTGCTCTCATGTCCATTGGAAATGGTGGCCTTCAATGTTCCATAGCATTTGGTGCAGACCAGGTGAATAGAAAAGATAATTCTGATAACCAGAGGGCACTGGAAATATACTTTAGCTGGTATTATGCTTCCTCAGCTATTTCTGTCATCATTGCCTTCACGGGAATAGTATATATCCAAGATCATCTTGGATGGAAACTAGGTTTTGGAGTCCCAGCAGTGCTTATGTTCTTATCCACTTTCTTCTTCTTCCTTGCATCTCCTATCTATATAAAGAATGAAACACACAGCAGCTTATTCACCGACTTCTTACGAGTGATTGTTGTGGCCTACAAGAACAGGAAACTTCGGTTACCGTCTAAGAAATCAGCAGGAATGTATCATCAGAAGAAGGACTCTGATCTTGTTTTTCCAACTGATAAACTAAGGTTTCTGAATAAAGCTTGCTTCATTAAAGATCCAGAAAAAGATATAGCCTCTGATGGATCAGCTTCAAATCCATGGAGTCTCTGCACAATAGATCAAGTAGAAGAGCTAAAGTCCATTGTTAAAGTTATTCCCCTATGGTCTACAGGAATCTTGATGTCACTTAACATTGGAGGCTCGTTTGGATTGCTGCAAGCAAAATCCCTGAACAGACATATCACCCGGAACTTCGAAGTGCCAGCAGGTTCTCTTACTGTAATTATGATATTTACAATATTTATATGGATAGCACTTTATGATCGTGTCATCATTCCTCTAGCATCGAAGCTCAGAGGAAAACCAGTTAGGATAAGTGCCAAGAGAAGAATGGGAATTGGGTTGTTTTTTTCGTTTCTCCACCTGGTAACAGCAGCTATTGTTGAGACTACAAGGCGAAAAAGAGCAATCAGTGAGGGATACATTAATGATACTCATGCAGTGTTGAACATGTCTGCAATGTGGCTTTTTCCTCAACTTTGCTTAGGTGGCATAGCTGAAGCATTCAATGTAATAGGCCAAAATGAGTTCTTCTATACCGAGTTTCCTAAGACTATGTCGAGCATCGCTTCATCCCTTTTTGGACTGGCAATGGCGGTAGGTTACGTGTTATCGTCTTTGGTATTTAGAATTGTGGAGAACGTTACTTCAAGAGGGGGTAAGGATGGATGGGTTTCAGATAACATTAACAAGGGTCGTTATGACAAGTATTATTGGGTTCTTGCTTCATTGAGTGCTGTCAATATACTCTATTATTTAGTATGCAGTTGGGCTTATGGTCCTACTGCTGATCAGGAATCAAAGGTAACTGAAGAAAATGATTCAAATGAGGAAGAATTACCATTAATAGAATTTGGGACTCAGGCTCGACATGACAAGTCAGGTTAG 1788 0.4144 MEKEVELSSSAEPKMASQPQQHKGGFVTMPFIIANEALARVATLGLLPNMVLYLMGNYHLHLSQATYILLLSVATTNFMPLPGAFIADSYLGRFLAVGLGSIITFLGMTLLWLTAMIPQARPPPCNPATESCKSATTEQMTMLISSLALMSIGNGGLQCSIAFGADQVNRKDNSDNQRALEIYFSWYYASSAISVIIAFTGIVYIQDHLGWKLGFGVPAVLMFLSTFFFFLASPIYIKNETHSSLFTDFLRVIVVAYKNRKLRLPSKKSAGMYHQKKDSDLVFPTDKLRFLNKACFIKDPEKDIASDGSASNPWSLCTIDQVEELKSIVKVIPLWSTGILMSLNIGGSFGLLQAKSLNRHITRNFEVPAGSLTVIMIFTIFIWIALYDRVIIPLASKLRGKPVRISAKRRMGIGLFFSFLHLVTAAIVETTRRKRAISEGYINDTHAVLNMSAMWLFPQLCLGGIAEAFNVIGQNEFFYTEFPKTMSSIASSLFGLAMAVGYVLSSLVFRIVENVTSRGGKDGWVSDNINKGRYDKYYWVLASLSAVNILYYLVCSWAYGPTADQESKVTEENDSNEEELPLIEFGTQARHDKSG* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2038 595 MobiDBLite consensus disorder prediction 566 595 - -
Lja3g2038 595 Gene3D MFS general substrate transporter like domains 1 568 IPR036259 -
Lja3g2038 595 Pfam POT family 96 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g2038 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja3g2038 595 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g2038 595 SUPERFAMILY MFS general substrate transporter 26 557 IPR036259 -
Lja3g2038 595 CDD MFS_NPF1_2 29 559 - -
Lja3g2038 595 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 83 107 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja3g2038 595 PANTHER PEPTIDE/NITRATE TRANSPORTER 14 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2038 Lja-Chr3 23747845 23750959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2038 9 580 Organic Solute Cotransporters AT1G52190 55.517 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2038 - K14638 gmx:100804235 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5103 3 93403264 93406670 Lja3g2038 3 23747845 23750959 PCT