Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5086 ATGGCACCCCATGGTGAATCTTATCCTTTGCCTTTGCCTAGTTCTTTCTCAAAACCCAACAACAACATGGTGTCAAAGCCACCAAGGGTGTCATCAAATCACATTCAAAGAACAATCTCAGACCTCACATTTGAGCTATCAAAAGAAGGGATTGATCATTTGACACTTCCACCAGTGGCTGAGGTTGAGGAAATTGCAAAGTGTGAGTGTTGTGGGATGTCAGAGGAGTGTACCCCTGAATACATTGAAAAGGTAAGAAGCAAATTCTTGGGGAAATGGGTGTGTGGGTTGTGTTCTGAGGCAGTGAAGGAGGAGTTGGTGAAGAATGGAGGGAAAAAGGAAGAGGCTTTGAGTGCACACATGAGTGCATGTGTCAGGTTCAACAAGTATGGGAGGAGTTTCCCTGTTCTGTTCCAAGCAGAGGCCATGAAAGAGATGCTGAAAAAGAGCAAAATGGAAGGGAGAAGGGCCAAGTCTTTCAATCCTAGGGAGAATGATAAAAAGAAAGGTGGGATTGCAAGAAGTTCAAGTTGCATTCCAGCTATTACAAGAGAGATCAATGATCTCACAAAATCAGGGTTGTAA 585 0.4376 MAPHGESYPLPLPSSFSKPNNNMVSKPPRVSSNHIQRTISDLTFELSKEGIDHLTLPPVAEVEEIAKCECCGMSEECTPEYIEKVRSKFLGKWVCGLCSEAVKEELVKNGGKKEEALSAHMSACVRFNKYGRSFPVLFQAEAMKEMLKKSKMEGRRAKSFNPRENDKKKGGIARSSSCIPAITREINDLTKSGL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5086 194 MobiDBLite consensus disorder prediction 151 176 - -
Lja3g5086 194 MobiDBLite consensus disorder prediction 151 171 - -
Lja3g5086 194 Pfam Protein of unknown function (DUF1677) 65 149 IPR012876 -
Lja3g5086 194 MobiDBLite consensus disorder prediction 13 32 - -
Lja3g5086 194 PANTHER CASP-LIKE PROTEIN (DUF1677) 12 190 - -
Lja3g5086 194 MobiDBLite consensus disorder prediction 1 32 - -
Lja3g5086 194 PANTHER OS01G0745000 PROTEIN 12 190 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5086 Lja-Chr3 93215305 93216518 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5086 - - gmx:100785884 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5086 3 93215305 93216518 Lja3g5086 3 93215305 93216518 ECH
Lja3g5086 3 93215305 93216518 Lja3g2020 3 23539222 23540308 PCT