Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5081 ATGGAAGGGGATTTGAGCAGAAGCATAAGCAGGAGTTTGAGCAGAACAAGTTGGAGAATGGAGGAAGTGTTTGCAAGTGGGAGGTATTCTAGAAGGACTTCAAGTGTTAATGAGGATGAAGAGGCTCTGAGGTGGGCTGCCATAGAGAAATTGCCAACATATGACAGGCTAAGAACAAGCATTCTCCAAACTTATGCAGAAGGTGATCCTGCTCAGCCAGACAGATTGCAACACAGGGAAGTTGATGTTACAAAGTTAGATGTTAATGAAAGGCAACAGTTCATTGACAAAATCTTCAGGGTTGCAGAAGAAGACAATGAAAAATACTTACAGAAGTTCAGACACAGAATTGATAAGGTTGGTATCCGATTGCCAGCAATTGAAGTGAGGTTTCAAAATTTGAATGTTGAGGCTGATTCCTACATTGGTAGCAGAGCTCTGCCATCCCTACCCAATGTTGCATTGAACATTATGGAATCAGCTCTAGGCTTATGTGGGATTAGTACTGCAAAGAAGACAAAGCTCACAATTCTGAAAAATGTCTCTGGCATTATTAAACCTTCAAGGATGACCCTACTGCTAGGTCCCCCTTCTTCAGGAAAAACAACCCTTTTGTTGGCATTGGCTGGAAAATTAGAATCTGATTTGAGGGTAACAGGAGAAATATCTTACAACGGTTGCAAGCTCAATGAGTTTGTACCTAGAAAGACTTCGGCATACATTAGCCAAAATGATGTACATATTGGAGAAATGACTGTAAAAGAAACCTTGGATTTCTCAGCTAGATGCCAAGGAATTGGGACACGATATGACCTATTAGCTGAGCTTGCACGAAGGGAAAAAGAAGCTGGTATATTTCCAGAGGCAGAACTTGACCTGTTCATGAAGGCTACTTCAATGGAAGGAACAGAAAGCAGTCTCATGACTGACTATACTCTGAAAATATTGGGACTTGATATCTGCAAAGATACCATGGTGGGTGATGAAATGCAGAGAGGTGTGTCTGGTGGCCAAAAGAAGCGTGTAACCACAGGTGAGATGATTGTGGGGCCCACAAAAACACTATTCATGGATGAGATATCAACGGGTCTTGATAGCTCCACAACATATCAGATAGTGAAATGCTTCCAGCAGATTACACACCTCACTGAAGCAACCATCTTCATGTCCCTGCTTCAACCTGCTCCTGAGACCTTTGATCTCTTTGATGATATCATCTTAATATCAGAGGGTCAAATAGTTTATGAGGGCCCACGTCAGCACATTGTTGAGTTCTTTGAGTCCTGTGGATTCAAATGCCCTGACAGAAAAGGAACTGCAGATTTTTTGCAAGAGGTTACTTCAAGGAAAGACCAAGAGCAATACTGGGCAAACAAACACATACCATACCGTTATGTTACAGTGACTGAATTTGCAAACAGGTTCAAGCAGTTCCATGTTGGCATGCAGCTTCAGAGTGAGTTGTCTGTGCCATTTGATAAGTCATCGGGACACAGAGCAGCTCTTGTTTTCAATAAATACACAGTGCCCACAATAGGACTTCTGAAAGCATGTTGTGACAAGGAATGGTTACTAATCAAGAGGAACTCTTTTGTCTATATATTTAAGACAGTTCAGATATGCATTATGGCCTTTATATCTGCAACAGTGTTCCTTAGGACTGAAATGAATAGAAGGAATGAGGATGATGCAGCACTTTACATTGGTGCAATCTTGTTTACCATACTCACAAACATGTTCAATGGTTTCTCTGAGCTACCACTTACAATTACAAGGCTTCCTGTGTTCTACAAGCATAGAGACCATCTTTTCCATCCTCCTTGGACTTACACCCTCCCCAATTTTCTTCTAAGGATTCCCATTTCCATGTTTGAGTCTTTGGTTTGGACGGTTATTACATATTACACAATAGGATTTGCACCAGAAGCTAGCAGGTTCTTCAAGCACATGTTGGTGGTGTTTCTTATTCAACAAATGGCAGCTGGGATGTTTAGGGTCATATCTGGAGTTTCTAGGACAATGATTATTGCTAATACTGGTGGAGCTCTCATGCTTCTTCTTGTCTTTTTACTTGGAGGTTTCCTCATTCCTAAACGTGACATTCCAAATTGGTGGGTGTGGGGCTATTGGGTTTCGCCACTGTCATATGCTTTCAATGCCTTTTCTGTGAATGAAATGTTTGCTCCAAGGTGGGACAAACGGTCTTCAAGTGGTTTAACCTCTTTGGGTGTAGCTGTATTAAATAACTTTGATGTTTTTACTGAAAAAAATTGGTACTGGATTGGTACAGCAGCTCTTATAGGTTTCATTATTTTCTTCAATGTTCTCTTCACCCTTGCACTCATGTACCTTAATCCTATTGGGAATAAACAAGCAATTATATCGGAAGAAGAAGCAAGTGAAATGGAAGTAGGAGGAGACTCCAAGGAAGAACCTAGACTTGTAAGGAAAGAGTCTAACAAAGAAGAACCACCTAGACAACTATTTTCTGCTGATGGAAACACCACAAGAGAAGTAGCAATGCAGAGAATGAGCAGTGGAGGTAACTCTAGTGGACGAGGAAATGCTGATCCAGTTCTTGAGTCAGCAGTAGGAGTTGCTCCAAAGAGAGGAATGGTTCTTCCATTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTACTATGTAGACATGCCTGCTGAAATGAAAGAGCAAGGAGTGACAGATAACAGGTTACAATTGCTTAGGGAAGTAACAGGTGCTTTTAGGCCTGGAGTTCTAACTGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCAGGAAGAAAGACAGGTGGCTACATTGAAGGAGATGTTAGAATATCTGGGTTCCCCAAGAATCAAGAAACATTTGCAAGAATTTCTGGATACTGTGAACAAACTGATATCCATTCACCCCAAGTTACAGTCAGAGAATCTTTGATTTACTCTGCCTTCCTCCGGTTACCAAGAGAAGTCACCAATGATGAAAAGATGAAATTTGTGGATGAAGTAATGGATTTGGTGGAGCTGAATAATCTCAAGGATGCTATAGTTGGGCTTCCGGGGGTTACAGGATTGTCAACTGAACAAAGAAAGAGGCTGACAATCGCTGTGGAGCTTGTCGCGAATCCTTCAATCATTTTCATGGATGAACCAACTTCAGGCCTCGATGCAAGAGCAGCAGCCATTGTTATGAGGACAGTGAGAAACACTGTTGACACTGGAAGGACAGTTGTCTGCACAATTCACCAACCTAGTATTGATATCTTTGAAGCCTTTGATGAGCTGTTGCTGTTGAAGAGAGGAGGGCAAGTGATCTACTCAGGTCCATTAGGAAGGAATTCACACAAGATTATAGAATACTATGAGGCAATTCCAGGGGTTCCAAAAATCAAAGATAAGTACAACCCAGCTACATGGATGTTAGAGGTAACATCTATAGCCGCAGAAGTTCGGCTTGGAATGGACTTTGCTGAATACTACAAATCATCGTCTTTGCACCAGAGAAACAAAGCACTTGTAAGTGAGTTAAGTACACCTCCTCCTGAAGCAAAAGATCTATATTTCCCCACTCAATTCTCTCAATCCACTTGGGGACAGCTTAAATCCTGTATATGGAAGCAGTGGCTGACTTACTGGAGGAGTCCAGATTATAACCTTGTCAGATATTTTTTCACCTTGGTTGCAGCTCTCATGGTGGGGACAGTATTTTGGAGAGTAGGCAAAAAAAGGGATAGCTCAGCTAACCTTAACACAGTCATAGGAGCACTCTATGGTTCTGTCTTTTTTGTTGGTGTTGACAACTGCCAAACTGTTCAACCAGTAGTAGCCATTGAAAGAACAGTGTTCTATAGAGAAAGGGCTGCTGGAATGTATTCTGCTTTACCTTATGCCATTGCACAGGTTCTTTGTGAAATACCATATGTATTTTTTCAAACTATATATTTCGCGCTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTGGAGAAGTTCTTTTGGTTCTTCTTCATCAGCTTCTTCTCCTTTTTGTACTTCACATATTATGGGATGATGACTGTTTCCATTACACCAAATCACATGGTGGCATCAATCTTTGCAGCCGCATTCTTTGGACTCTTCAATCTTTTCTCAGGATTCTTTATCCCAAAACCAAAAATTCCTAAATGGTGGGTTTGGTATTATTGGATTTGCCCTGTAGCATGGACAGTGTATGGGTTAATTGTCTCACAATATAGAGATATAACAACAGGCATTAGTGTGCCTGGGAGGTCTGATCAACCTGCACTCAAAGACTACATTGAAGACCATTATGGATTCAAATCAGACTTCATGGGGCCAGTTGCTTGTGTTTTGGTCGCTTTCCCTGTCTTCTTTGCCTTTGTATTTGCTTTCGCCATCAAAGTACTCAACTTCCAAACAAGATAG 4452 0.4124 MEGDLSRSISRSLSRTSWRMEEVFASGRYSRRTSSVNEDEEALRWAAIEKLPTYDRLRTSILQTYAEGDPAQPDRLQHREVDVTKLDVNERQQFIDKIFRVAEEDNEKYLQKFRHRIDKVGIRLPAIEVRFQNLNVEADSYIGSRALPSLPNVALNIMESALGLCGISTAKKTKLTILKNVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLESDLRVTGEISYNGCKLNEFVPRKTSAYISQNDVHIGEMTVKETLDFSARCQGIGTRYDLLAELARREKEAGIFPEAELDLFMKATSMEGTESSLMTDYTLKILGLDICKDTMVGDEMQRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQITHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYEGPRQHIVEFFESCGFKCPDRKGTADFLQEVTSRKDQEQYWANKHIPYRYVTVTEFANRFKQFHVGMQLQSELSVPFDKSSGHRAALVFNKYTVPTIGLLKACCDKEWLLIKRNSFVYIFKTVQICIMAFISATVFLRTEMNRRNEDDAALYIGAILFTILTNMFNGFSELPLTITRLPVFYKHRDHLFHPPWTYTLPNFLLRIPISMFESLVWTVITYYTIGFAPEASRFFKHMLVVFLIQQMAAGMFRVISGVSRTMIIANTGGALMLLLVFLLGGFLIPKRDIPNWWVWGYWVSPLSYAFNAFSVNEMFAPRWDKRSSSGLTSLGVAVLNNFDVFTEKNWYWIGTAALIGFIIFFNVLFTLALMYLNPIGNKQAIISEEEASEMEVGGDSKEEPRLVRKESNKEEPPRQLFSADGNTTREVAMQRMSSGGNSSGRGNADPVLESAVGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVTDNRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPREVTNDEKMKFVDEVMDLVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVIYSGPLGRNSHKIIEYYEAIPGVPKIKDKYNPATWMLEVTSIAAEVRLGMDFAEYYKSSSLHQRNKALVSELSTPPPEAKDLYFPTQFSQSTWGQLKSCIWKQWLTYWRSPDYNLVRYFFTLVAALMVGTVFWRVGKKRDSSANLNTVIGALYGSVFFVGVDNCQTVQPVVAIERTVFYRERAAGMYSALPYAIAQVLCEIPYVFFQTIYFALIVYAMVSFEWKVEKFFWFFFISFFSFLYFTYYGMMTVSITPNHMVASIFAAAFFGLFNLFSGFFIPKPKIPKWWVWYYWICPVAWTVYGLIVSQYRDITTGISVPGRSDQPALKDYIEDHYGFKSDFMGPVACVLVAFPVFFAFVFAFAIKVLNFQTR* 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5081 1483 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 9 1483 - -
Lja3g5081 1483 MobiDBLite consensus disorder prediction 798 830 - -
Lja3g5081 1483 Gene3D - 165 470 IPR027417 -
Lja3g5081 1483 Pfam ABC-transporter N-terminal 90 153 IPR029481 -
Lja3g5081 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 435 IPR003439 GO:0005524
Lja3g5081 1483 Pfam Plant PDR ABC transporter associated 731 794 IPR013581 -
Lja3g5081 1483 Gene3D - 895 1129 IPR027417 -
Lja3g5081 1483 Pfam ABC-2 type transporter 1207 1420 IPR013525 GO:0016020|GO:0140359
Lja3g5081 1483 Pfam ABC-2 type transporter 515 725 IPR013525 GO:0016020|GO:0140359
Lja3g5081 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 881 1133 IPR003439 GO:0005524
Lja3g5081 1483 CDD ABCG_PDR_domain1 165 417 IPR034001 -
Lja3g5081 1483 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1483 - -
Lja3g5081 1483 SMART AAA_5 918 1110 IPR003593 -
Lja3g5081 1483 SMART AAA_5 187 419 IPR003593 -
Lja3g5081 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Lja3g5081 1483 Pfam ABC transporter 178 360 IPR003439 GO:0005524
Lja3g5081 1483 CDD ABCG_PDR_domain2 878 1116 IPR034003 -
Lja3g5081 1483 MobiDBLite consensus disorder prediction 805 825 - -
Lja3g5081 1483 Pfam ABC-2 type transporter 1090 1151 IPR043926 GO:0140359
Lja3g5081 1483 Pfam ABC-2 type transporter 393 471 IPR043926 GO:0140359
Lja3g5081 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 216 IPR027417 -
Lja3g5081 1483 Pfam ABC transporter 909 1061 IPR003439 GO:0005524
Lja3g5081 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 903 1118 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5081 Lja-Chr3 93140487 93153826 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5081 K08711 - gmx:100801386 2466.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5081 3 93140487 93153826 Lja3g5081 3 93140487 93153826 ECH
Lja3g5081 3 93140487 93153826 Lja3g2009 3 23274515 23283933 PCT