Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5065 ATGAAGATTAGAGAGGAGACGGGTATAAAGCCAACTCTGCTGAAATTTGGTTTTGCTTTGGCTCTTTCATTTGCTGGATTTCTCTTCTCACGCCTCAGAATTCGACGAATCAAGCCTCCTCCTAAGTCACCTACTGGGCATGCTTCAGCTCATGGGAATGAAGTTAATTTAGGAGAAGCATTAAGCACTTGCAACACTGTCTCGGAGGAAAAATTTCTATATGCTCAGGAAGAAACATGCATCAGTGGGGGGACAAGTGACAATTCTCCTAGAAGTAATCAAAATGGAGCTAAAGAAGAGTTCTTGCTTCCTGAATTTAATGATCTTGTTAATGAAGTAGACTTTGGAGCCACTATTGTTGGAAATTCTTTTAAAAAAGCTATAGAATTACCAAGGTTACAAGTAGGATCAGGTCCCGAGAAGGATGATTATGAGCAAGAGGCAAGTCAACTCAGGAACATGATTAGAATGCTTCAAGACAGAGAACAAAGTCTTGAGGTCCAACTTCTTGAGTACTGCGGTCTTAGAGAGCAAGAAGCAGCTGTGGCAGAGCTCCAAAATAGATTGAAGATAAGTAATATGGAGGTAAAGATGTTCAATCTGAAGGTAAAGATGTTACAGTCTGAGAATTGCAGGTTAAAGGAACAGGTTGCTGATCATGCAAAGGTTCTGGCTGAGCTCGAGACTGCGAAAGCGAAAGTCGAACTTCTCAATACGAAAATTAGGCATGAAGCTAAACAGAATAGGGAGCATATCAGAACTCTTCAAAAAAGAGTCGCCGAGTTGCGAGACCAAGAATGCAAAGATGTTACTTTTGATCAAGATATTCAAATAAAGCTGCAAAGGCTAAAGGGTCTTGAATCTGAAGTGGAAGAGTTGAGAAAAACTAATTTAGAATTGCAGATGGAAAATTCTGACTTAGCTTGTAGATTGGATTCTACCCAAGTCCTTGCAAATGCTGTTGTTCTAGAAGACAATGAGGAAAATGCTTCGGTGCAAGAAAGGGACCGTCTTAGACAAGAAAACGAGCGCTTGGTGAGGGAAATTGAGCAACTACAATGTGATCGATGTTCAGACCTTGAAGAATTAGTGTACTTGCGGTGGGTAAATGCATGCTTAAGATATGAACTGCGAAATTACCAGCCCCAACCCGGTAAAACAGTTGCAAAGGACTTAAGTAAGAGCTTAAGCCCCACTTCCGAGAAGAAAGCTAAGCAGCTTATACTTGAATATGCAAATAATACTGATGGACAAGGGGGGATTGTGGACTTTGATTTAGACCAATGGTCCTCCTCACAGGCTTCTTTTCTGACCGACTCCGAAGAGATCAGTGATGAGTTTTCTTCTGCTGATAATTCATCTGCTGTCAAAGCTAGCCCCACAAGCCAGATCAAAATTTTTAGCAAGCTTAGGAGACTGTTACTAGGAAAAGATAATAATCATCAGCATAGACATATTTCATCAGGATATCGAGAAGACACAAATTCTCCGCGGCCGAGTAAATCAACCAGAAATGAGGGTAGAACTTCCTTTGATTTCTCCAGGTCGACGAGTATGAAGGAAGGGGGTAGGAGATACTCAGGTAGCATGGTCATGGGATTGGGAAGCTCAAATAACTTGAGAAATGAAGGTTCCTTATCATATTCCTTAGACACAGAAAAATCTGATATAGAGAAATTTGCAGAAGCTTTAAAAGATTCTAGTGTGGGTGCTAAACATCAAAGGCGTAGAAGAGCAGCATCATACAGTTAG 1752 0.4092 MKIREETGIKPTLLKFGFALALSFAGFLFSRLRIRRIKPPPKSPTGHASAHGNEVNLGEALSTCNTVSEEKFLYAQEETCISGGTSDNSPRSNQNGAKEEFLLPEFNDLVNEVDFGATIVGNSFKKAIELPRLQVGSGPEKDDYEQEASQLRNMIRMLQDREQSLEVQLLEYCGLREQEAAVAELQNRLKISNMEVKMFNLKVKMLQSENCRLKEQVADHAKVLAELETAKAKVELLNTKIRHEAKQNREHIRTLQKRVAELRDQECKDVTFDQDIQIKLQRLKGLESEVEELRKTNLELQMENSDLACRLDSTQVLANAVVLEDNEENASVQERDRLRQENERLVREIEQLQCDRCSDLEELVYLRWVNACLRYELRNYQPQPGKTVAKDLSKSLSPTSEKKAKQLILEYANNTDGQGGIVDFDLDQWSSSQASFLTDSEEISDEFSSADNSSAVKASPTSQIKIFSKLRRLLLGKDNNHQHRHISSGYREDTNSPRPSKSTRNEGRTSFDFSRSTSMKEGGRRYSGSMVMGLGSSNNLRNEGSLSYSLDTEKSDIEKFAEALKDSSVGAKHQRRRRAASYS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5065 583 PANTHER ACTIN BINDING PROTEIN FAMILY 4 581 - -
Lja3g5065 583 Coils Coil 141 168 - -
Lja3g5065 583 MobiDBLite consensus disorder prediction 531 545 - -
Lja3g5065 583 Coils Coil 220 265 - -
Lja3g5065 583 MobiDBLite consensus disorder prediction 492 523 - -
Lja3g5065 583 Coils Coil 276 310 - -
Lja3g5065 583 MobiDBLite consensus disorder prediction 478 545 - -
Lja3g5065 583 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 4 581 IPR040265 -
Lja3g5065 583 Coils Coil 323 355 - -
Lja3g5065 583 Coils Coil 175 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5065 Lja-Chr3 92886152 92889798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5065 - - lja:Lj3g3v0290300.1 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5065 3 92886152 92889798 Lja3g5065 3 92886152 92889798 ECH
Lja3g5065 3 92886152 92889798 Lja3g1993 3 23029133 23032472 PCT