Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1993 ATGGAGAAAAGAATTATTAGAAGGTTTTTAAAATTATTTGGCAGAGAAGAGAAGCGCATGAAGCCTATTCTGCTGAAATGTGGTTTGGCTTTGGCTCTTACCTTTGCTGGATTTCTCTACTCTCACCTCAGAACAAAAAGAATCAAGGCTTCTGCTTCATCCCCTAGGGGACACCCTCAAGGACATGGGAACGAAGGAGGAGGTAGAAGAGTAGCATCTTGCAGCAATCTTTCAGAGGGAAATTTTTTGGACACTGAGGAAGCATGCATCAAGAAGGGGGTTGGTAAAAATTCTCAACGTTGTCTCTCTCCAAGAACTAAGCAAAGTGGAGAGGAAGATGAGTTCCTTCTACCTGAATTCAATGATGTTATGAAGGATGCAGAGTTCGGAGTTGCAGGAAATTCTTTTAAGAAAGTTGGACCTCCTGTAGCATATGCAAGTCTTGAGAAGGATGACTATGAGCAAGAGATCTGGCAGCTCAGGAACATGATCAGAATGCTTCAGGAGAGGGAACGAAGCCTCGAGGTTCAACTTCTTGAATACTGCGGTCTCAAAGAGCAAGAAACAGTTGTCATGGAGCTCCAAAACAGATTGAAGATAAGTAACATGGAGGCAAAGATGTTCAATCTCAAGGTTGAGACCTTGCAGTCCGAGAATTGGAGGTTAGCAGAACAGGTGGCTGATCATGCAAAAGTACTGGCTGAGCTTGATGCTGCTAAAACCAAAGTCAAGTTTTTGAAGAGGAAAATCAGGCATGAAGCTGAACAGAACAAGGAGCAAATCATAAATCTTAAACAAAGAGTTTCCAAGTTGCAAGACCTGGAAAGCCAAGCTACTGCTAGTGATCAAGAAATTGAAACCAAGCTGAGAAGGCTAAAGGATCTTGAGGCCGAGGCAGAACAGTTGCGGAAAACTAATTTGAGACTGCAGATGGACAATTCTGACTTAGCTAGAAGGTTGGACTCTACTCAGATCCTTGCCAATGCTGTTCTGGAAGATCCAGAGGCAGATGCTTTGAGGGAAGAAGGCGAGCGTCTTAGACTAGAGAATGAGGGCTTGACGAAGGAAGTTGAGCAACTACAAGCCGATCGATGCTCAGATGTTGAAGAGTTAGTCTACTTGAGGTGGATAAATGCTTGCTTAAGGCATGAGATGCGAAACTATCAACCGCCTCCTGGTAAAACCGTCGCGAGGGACTTGAGTAAGAGTTTAAGCCCTACATCTGAGAAGAAAGCCAAGCAGCTCATAGTTGAATATGCAAATAACACTGAAGGGAGAAGGAGCCTTTCTGATTTTGATTCTGACCAATGGTCCTCCTCCCAGGCTTCTTTTCTAGAAGACTCTGGTGAATGTGATGATTATTCTCCTCTTGAGAATTCATCTGATGCCAGAGTTAACAACACCACAAGTAAATCCAAGATTTTCAGCAAGCTTATGAGGCTGATACAAGGCAAAGATAACCATCATAACCGTAGTCGAGTTACATCTCAAGAAAAATATGTATCTCAAGAAGATAGCAACACTCCAAATTTCAGATTTAGTATATCAACTGGGAATGATACTAGTAGAGCTGAGGGTCGTCGTCGGAGTATTAGCGAGTTTGCAACTCCCTCTGGCATATCTAGAACTTCCTTAGATTTGAGCCGTACGATGAGTTTGAAAGATGAAATTAGGAGAAATCCAGATGTCCTTGCCTCAGGAAGCTCAAGGAATTTCACTCCAAGCAAAAGGGGTTCAGGAGATTTAAAAAGCTCAGTAAATTCTTTCTCAGATTCCTCTCGCTCAGACAATTCTAATTTGGTGAAATATGCTGAAGCTTTAAAGGACTCTAGTGGGACTCCAAAACATAAGATACATCGAAGAACAGCATCATTTAGTTCATTTTAA 1887 0.424 MEKRIIRRFLKLFGREEKRMKPILLKCGLALALTFAGFLYSHLRTKRIKASASSPRGHPQGHGNEGGGRRVASCSNLSEGNFLDTEEACIKKGVGKNSQRCLSPRTKQSGEEDEFLLPEFNDVMKDAEFGVAGNSFKKVGPPVAYASLEKDDYEQEIWQLRNMIRMLQERERSLEVQLLEYCGLKEQETVVMELQNRLKISNMEAKMFNLKVETLQSENWRLAEQVADHAKVLAELDAAKTKVKFLKRKIRHEAEQNKEQIINLKQRVSKLQDLESQATASDQEIETKLRRLKDLEAEAEQLRKTNLRLQMDNSDLARRLDSTQILANAVLEDPEADALREEGERLRLENEGLTKEVEQLQADRCSDVEELVYLRWINACLRHEMRNYQPPPGKTVARDLSKSLSPTSEKKAKQLIVEYANNTEGRRSLSDFDSDQWSSSQASFLEDSGECDDYSPLENSSDARVNNTTSKSKIFSKLMRLIQGKDNHHNRSRVTSQEKYVSQEDSNTPNFRFSISTGNDTSRAEGRRRSISEFATPSGISRTSLDLSRTMSLKDEIRRNPDVLASGSSRNFTPSKRGSGDLKSSVNSFSDSSRSDNSNLVKYAEALKDSSGTPKHKIHRRTASFSSF* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1993 628 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 9 628 - -
Lja3g1993 628 Coils Coil 336 363 - -
Lja3g1993 628 Coils Coil 150 170 - -
Lja3g1993 628 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 9 628 IPR040265 -
Lja3g1993 628 Coils Coil 229 319 - -
Lja3g1993 628 Coils Coil 184 204 - -
Lja3g1993 628 MobiDBLite consensus disorder prediction 564 600 - -
Lja3g1993 628 MobiDBLite consensus disorder prediction 483 528 - -
Lja3g1993 628 MobiDBLite consensus disorder prediction 49 70 - -
Lja3g1993 628 MobiDBLite consensus disorder prediction 496 521 - -
Lja3g1993 628 MobiDBLite consensus disorder prediction 558 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1993 Lja-Chr3 23029133 23032472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1993 - - gmx:100781632 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1993 3 23029133 23032472 Lja3g1993 3 23029133 23032472 ECH
Lja3g5065 3 92886152 92889798 Lja3g1993 3 23029133 23032472 PCT