Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5049 ATGGCTGGGATTGTAGTGGTTTTTGACTTTGACTCCACAATCATCGAGTGTGATAGTGATAATTGGCTACTTGATGAGTTTGGTTTAACTGAGAAATTCTATCAGCTTCTTCCTACCACGCCTTGGGGTTGGAACCCTCTCATGGATAAGATGATGAATGAACTTCATTCACAAGGAAAAACCATTGAAGACATTGTTGAAGTTCTGAAAAGGACACCTATACATCCTTGCATTGTTCCAGCCATTAAGGCAGCTCATTCCCTCGGGTGTGAGCTGAAGATTGTGAGCGATGCAAATATTTTCTTCATTGAAACAATTTTGAAGCATCATGGGGTGAGGCATTGTTTCTCAGAGATTACTGCAAACCCCAGTTTTGTTAATGAAGAAGGGAGGCTCAGAATTGGCCCCTACTATGATTATCTGAAATCTTCTCATGGATGCAGTCTATGTCCACCAAACATGTGCAAGGGATTGGTGATGGATAGGATCCAAAATTCACTTGATGCTGCAGGAAAGAAGAAATTCATGATCTATCTTGGAGATGGAAGTGGAGACTTTTGTCCAAGTTTGAAGCTCAAAGATAGTGATTATTTGATGCCTAGAACAAACTTCCGATTGTGTGATTTAGTATCTAAAAACTCCAATGCCATAAAGGCAGAGGTACATGCTTGGAGAGATGGGGCAGAGCTTGAGAATGTTCTGCTCCATATTATCAACAAAACTATCAATGGTGAAGGATCAAACGGCACAAGTGGTTCTACTCCAATAATTTCAGTGGATTGCAAGTTTGGGACAATTTCAATTGATGGTCATAACCCATTCCCTAAAGCCCTTTCAGTTCCTATTTAA 849 0.404 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGKTIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEITANPSFVNEEGRLRIGPYYDYLKSSHGCSLCPPNMCKGLVMDRIQNSLDAAGKKKFMIYLGDGSGDFCPSLKLKDSDYLMPRTNFRLCDLVSKNSNAIKAEVHAWRDGAELENVLLHIINKTINGEGSNGTSGSTPIISVDCKFGTISIDGHNPFPKALSVPI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5049 282 Pfam Putative Phosphatase 4 238 IPR016965 GO:0016791
Lja3g5049 282 SUPERFAMILY HAD-like 5 188 IPR036412 -
Lja3g5049 282 PIRSF PLP_phosphatas_PHOSPHO2 1 242 IPR016965 GO:0016791
Lja3g5049 282 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 281 IPR016965 GO:0016791
Lja3g5049 282 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 201 IPR006384 GO:0016791
Lja3g5049 282 Gene3D - 2 193 IPR023214 -
Lja3g5049 282 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 281 - -
Lja3g5049 282 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5049 Lja-Chr3 92665287 92667247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5049 K13248 - gmx:100789743 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1482 3 15825839 15827179 Lja3g5049 3 92665287 92667247 PCT