Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g1482 | ATGTCTGGAGTTGTGGTTGTTTTCGACTTTGACAAGACCATTGTTGATTGCGATAGTGATAACTGGGTCGTCGACGAGTTGGGTTTCACTGATTTGTTTAATCAACTCCATCCCACCATGCCTTGGAACTCCCTCATGGACAGGATGATGATGGAGCTTCATTCAAAAGGTGTAACTATTAAGGAGATTGAAGAGGTTCTACATAGGATTCCTATTCACCCCAGAGTGATACCTGCTATTAAAGCAGCTCATGCTTTAGGGTGTGATTTAAGGATTGTGAGTGATGCAAACATGTTTTTCATTGAGACAATTCTGGAGCATTTGGGAATAAGGGAATACTTCTCAGAGATTAACACTAATCCAGGTTATGTTAATAAAGAAGGAAGGTTAAGAATTTTTCCTTACCATGATTTCAACAAGGCCCCCCATGGCTGCAGCTTGTGCCCACCAAACATGTGTAAGGGTTTAATCATAGACAGAATACAAGGTTTATTTTCTCAAGAGGATGACAAGAGAATCATCTATCTTGGTGATGGGAGTGGTGACTATTGCCCAAGCTTAAGGCTTAAACAGAGAGATTTCATGATGCCAAGGAAGAATTTTCCTGTGTGGGATTTGATATGCAAAGACCCTTTGCTTCTGAAAGCTGAAATCCATGGTTGGACTAATGGAGAAGAGTTGGAGCATGTTCTCTTGCATTTAATCAACATGATTTCTTTGGACAAAGGCACTCAGTTTATATCATCTGACTGCAAAACACAGACTCTTTGTATATCTGCTCATGAGCCTTTGCCTAAAGTTCTTCATGTTCGACCATAA | 819 | 0.4029 | MSGVVVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLHPTMPWNSLMDRMMMELHSKGVTIKEIEEVLHRIPIHPRVIPAIKAAHALGCDLRIVSDANMFFIETILEHLGIREYFSEINTNPGYVNKEGRLRIFPYHDFNKAPHGCSLCPPNMCKGLIIDRIQGLFSQEDDKRIIYLGDGSGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPLLLKAEIHGWTNGEELEHVLLHLINMISLDKGTQFISSDCKTQTLCISAHEPLPKVLHVRP* | 273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g1482 | 272 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 187 | - | - | |
| Lja3g1482 | 272 | Gene3D | - | 2 | 188 | IPR023214 | - | |
| Lja3g1482 | 272 | PANTHER | INORGANIC PYROPHOSPHATASE | 1 | 270 | - | - | |
| Lja3g1482 | 272 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 4 | 199 | IPR006384 | GO:0016791 | |
| Lja3g1482 | 272 | SUPERFAMILY | HAD-like | 5 | 190 | IPR036412 | - | |
| Lja3g1482 | 272 | Pfam | Putative Phosphatase | 5 | 235 | IPR016965 | GO:0016791 | |
| Lja3g1482 | 272 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 239 | IPR016965 | GO:0016791 | |
| Lja3g1482 | 272 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 270 | IPR016965 | GO:0016791 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g1482 | Lja-Chr3 | 15825839 | 15827179 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja3g1482 | K13248 | - | gmx:100782134 | 488.034 |
Event-related genes