Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5031 ATGACAGACAGGGTCTACCCTTCCGCCAAAACCACCGCCGCCACAAACGGCACCGCCACCACCAACCCAACTTTCCCCGCCACAAAGGCCCAACTCTACGGCGCCAACCGCCCTGCTTACCGCCCTCAACCCCTCCACCGCCGCACCCGCCGCCGCTGCTTCTGCACCTTCTGCTTCTGGCTAATCCTCATCATCCTCATCCTCCTCCTCATCATCGGCGGTGCTGGCGTCGCCTTCTACCTCCTCTACCGCCCCCACCACCCCACCTTCTCCGTCACCTCCCTCAAACTCTCCTACCTCAACCTCACCTCCTCCTCAACCCTCTCCTCCAAATTCGACCTCACCGTCGCCGCCACAAACCCCAACAAGAAAAACATCGCATTCTCCTACCTACCCACTTCCATCACCATACTCTCCGGCGACGTCGACGTCGGCGACGGAACCATACCCACTTTCCATCACGGCAAGAAAAACACAACACTGCTGAAATCTTCGATTTCGAGCAGTGGGCATGAGTTGGATGCTGACGCTGCGAAGAAGTTGAAGGCGAGCATGAAGAGCAAGAACGGGTTGCCATTGAAGGTGAAGCTCGACACGAAGGTGAAGGCTACAATGGGGAAATTGAAGACTCCTCGAGTTGGAATCAGAGTCTCATGTGATGGAATCAGAGTCACTCTTCCGACAGGGAAGAAACCTGCGACGGCGTCGACCTCGAACGCGAAATGCAATGTTGATGTCAGATTCAAGATCTGGAAATGGACGGTTGGATGA 771 0.5603 MTDRVYPSAKTTAATNGTATTNPTFPATKAQLYGANRPAYRPQPLHRRTRRRCFCTFCFWLILIILILLLIIGGAGVAFYLLYRPHHPTFSVTSLKLSYLNLTSSSTLSSKFDLTVAATNPNKKNIAFSYLPTSITILSGDVDVGDGTIPTFHHGKKNTTLLKSSISSSGHELDADAAKKLKASMKSKNGLPLKVKLDTKVKATMGKLKTPRVGIRVSCDGIRVTLPTGKKPATASTSNAKCNVDVRFKIWKWTVG* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5031 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 254 - -
Lja3g5031 256 Pfam Late embryogenesis abundant protein 115 219 IPR004864 -
Lja3g5031 256 SUPERFAMILY LEA14-like 85 211 - -
Lja3g5031 256 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g5031 256 Gene3D - 82 215 - -
Lja3g5031 256 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5031 Lja-Chr3 92495660 92497009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5031 29 241 EF-hand Containing Proteins AT5G21130 28.636 1.16e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5031 - - gmx:100819194 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5031 3 92495660 92497009 Lja3g1497 3 16051862 16053013 PCT